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1 vote
2 replies
962 views
Basics: How do I generate a VCF file from a genome and annotate it with Clinvar
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updated by colindaven 844 • | written by nanibito 1
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updated by i.sudbery 2.3K • | written by biobiu 15
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5 votes
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updated by yura.grabovska 94 • | written by rbronste 42
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written by pinheirofabiano 14
0 votes
0 replies
509 views
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0 votes
1 reply
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4-way plot for comparing DEGs between 4 genotypes
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updated by dthorbur 350 • | written by jaint1 0
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updated by GenoMax 16K • | written by Julián 0
1 vote
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How to figure out adapter sequence to use for trimming old miRNAseq data
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written by hsothers 1
0 votes
1 reply
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Do I need to remove doublets after before or after running hashsolo?
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updated by tothepoint 94 • | written by bioinfo 19
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2 replies
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Appropriate regression analysis for relationship of WGCNA modules with clinical traits
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0 votes
0 replies
649 views
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0 votes
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484 views
An article analyzing the differences in results caused by the use of dosage and hard call in GWAS
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written by Isaac 0
1 vote
2 replies
4.0K views
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updated by yura.grabovska 94 • | written by G.S 6
0 votes
3 replies
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updated by pbioinf 16 • | written by QX 9
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1 reply
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DESeq2 for DE analysis of proteins
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updated by dsull 781 • | written by 4732b159 0
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1 reply
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updated by rfran010 174 • | written by sk_24 0
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updated by rfran010 174 • | written by adarsh 8
0 votes
0 replies
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written by ruth 2
0 votes
1 reply
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VCF file GL field confusion
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written by mtrw85 1
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updated by Pierre Lindenbaum 17K • | written by _quantum_girl_ 8
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6 replies
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written by Anisur Rahman 8
0 votes
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updated by BioinfGuru 214 • | written by bioinfo1994 2
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vg giraffe handling of second vs. supplemental/split alignments, novel SVs, and associated MAPQ
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updated by Jordan M Eizenga 78 • | written by Thomas 0
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0 replies
604 views
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0 votes
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SPADES output
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3 replies
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alphafold hpc large fasta file job
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0 votes
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How to obtain the names and chromosome position of all immunoglobulin genes from mouse mm10 assembly genome using ucsc?
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0 votes
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Associations with small-ish patient clinical data with bulk RNA-seq expression
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updated by BioinfGuru 214 • | written by noodlejackson 4
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Help with complex Volcano Plot
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written by jmannhei 1
0 votes
2 replies
919 views
A Linux server reports an error when processing RNA-seq data comparison
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updated by GenoMax 16K • | written by 211122070082 0
0 votes
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Programmatic JS ways to get interesting information about genes by symbol or accession ID
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gene ids do not have corresponding valid gene names kallisto bus tools
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updated by dsull 781 • | written by naili mortadha 0
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updated by rfran010 174 • | written by BioStar55555 1
0 votes
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How can I get an allele count table from a .vcf file?
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0 votes
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Error in name duplicate for miRNA differential analysis
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multiple response SRR URLs for the same service 's3'
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0 votes
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bamCoverage --MNase error : function a paired end library is required.
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0 votes
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960 views
Rsubread with unexpected read order results
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updated by GenoMax 16K • | written by thomas.heigl.ibk 2
0 votes
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608 views
Interpreting cNMF with 2 equivalent best ranks
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written by yura.grabovska 94
2 votes
8 replies
6.0K views
Running fastqc in parallel
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updated by BioinfGuru 214 • | written by pablo 35
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992 views
how to colorize snakemake editing text
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updated by Michael Dondrup 5.6K • | written by QX 9
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Low libsize of one sample after STAR+featureCounts pipeline w.r.t other samples
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written by DYLAN NICO 0
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