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andres.firrincieli
andres.firrincieli
Role:
Moderator
Reputation:
4,100
Joined:
9.2 years ago
Last seen:
3 days ago
Location:
Bologna
Latest posts by user
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Comment: Comment: Unusual scale-free topology fit in WGCNA after MaxQuant/Perseus preprocessing of
written by andres.firrincieli andres.firrincieli
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2 replies
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Comment: Comment: Unusual scale-free topology fit in WGCNA after MaxQuant/Perseus preprocessing of
written by andres.firrincieli andres.firrincieli
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Answer: Answer: Filtering KofamScan output for KEGGDecoder usage
written by andres.firrincieli andres.firrincieli
2 votes
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Answer: Answer: Creating Gene Ontology (GO) plot
written by andres.firrincieli andres.firrincieli
1 vote
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Comment: Comment: Non-specific annotations in KEGG, Pfam for plant denovo RNA seq data
written by andres.firrincieli andres.firrincieli
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1 reply
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Comment: Comment: Non-specific annotations in KEGG, Pfam for plant denovo RNA seq data
written by andres.firrincieli andres.firrincieli
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Comment: Comment: Low overlap due to poor reverse read quality in 2×300 bp V3–V4 amplicon sequenci
written by andres.firrincieli andres.firrincieli
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Answer: Answer: Can PC1 (eigengenes) from different gene sets be compared in WGCNA/hdWGCNA?
written by andres.firrincieli andres.firrincieli
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Comment: Comment: Bacterial community profiling using 16S rRNA nanopore sequencing
written by andres.firrincieli andres.firrincieli
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Answer: Answer: Low mapping in Metagenome assembly
written by andres.firrincieli andres.firrincieli
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Answer: Answer: Hello, I analyzed ONT 16S amplicon data using the EPI2ME workflow with Minimap2,
written by andres.firrincieli andres.firrincieli
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Answer: Answer: What file types can I use for the comparison of proteomes?
written by andres.firrincieli andres.firrincieli
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Answer: Answer: NCBI Genomes submission - what to do if FCS report is incorrect? Stuck with nowh
written by andres.firrincieli andres.firrincieli
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Answer: Answer: WGCNA basic queries
written by andres.firrincieli andres.firrincieli
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1 reply
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Answer: Answer: Statistics
written by andres.firrincieli andres.firrincieli
2 votes
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Answer: Answer: KEGG Orthologs (KO) from 16S vs. Metabolites
written by andres.firrincieli andres.firrincieli
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Comment: Comment: DESeq2 on metagenome KO counts
written by andres.firrincieli andres.firrincieli
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1 reply
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Answer: Answer: DESeq2 on metagenome KO counts
written by andres.firrincieli andres.firrincieli
1 vote
1 reply
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Comment: Comment: help with modkit on nanopore sequencing data.
written by andres.firrincieli andres.firrincieli
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Comment: Comment: My PCA plot is weird: PC1 with 98.684% variance and PC2 with 0.582% variance
written by andres.firrincieli andres.firrincieli
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