This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Pierre Lindenbaum
Pierre Lindenbaum
Role:
Admin (
Reputation:
167,170 (Trusted)
Joined:
16.6 years ago
Last seen:
1 week ago
Location:
France/Nantes/Institut du Thorax - INSERM UMR1087
Google Scholar:
o2j-d94AAAAJ

Bioinformatics , Genetics

yokofakun.bsky.social https://genomic.social/@yokofakun https://github.com/lindenb/jvarkit

Latest posts by user
0 votes
0 replies
0 views
Comment: Comment: ATGCFLOW: web-based FASTQ-to-variant workflow with annotation and review - feedb
written by Pierre Lindenbaum 17K
0 votes
0 replies
0 views
Comment: Comment: ExomeFlow: reproducible WES analysis from paired FASTQs to annotated variants
written by Pierre Lindenbaum 17K
1 vote
1 reply
0 views
Comment: Comment: GATES: automated whole-exome sequencing analysis for somatic and germline varian
written by Pierre Lindenbaum 17K
1 vote
1 reply
0 views
Comment: Comment: Is bcftools merge a right choice to combine three rice populations?
written by Pierre Lindenbaum 17K
2 votes
0 replies
85 views
News: AlphaGenome Atlas: A predictive map of every possible DNA letter change in the human genome
alphagenome google
written by Pierre Lindenbaum 17K
2 votes
3 replies
238 views
News: is Biomart dead ? "We have frozen BioMart but it remains accessible via our archive servers."
ensembl
updated by Istvan Albert 10K • | written by Pierre Lindenbaum 17K
2 votes
1 reply
0 views
Answer: Answer: Is bcftools merge a right choice to combine three rice populations?
written by Pierre Lindenbaum 17K
0 votes
0 replies
0 views
Comment: Comment: Problem with QQ plot in sQTL
written by Pierre Lindenbaum 17K
6 votes
0 replies
0 views
Answer: Answer: For bioinformatics work, which do you prefer: ChatGPT or Claude, and why?
written by Pierre Lindenbaum 17K
0 votes
0 replies
0 views
Comment: Comment: correct way to determine unique sites in VCF files
written by Pierre Lindenbaum 17K
0 votes
0 replies
0 views
Comment: Comment: How can I speed up Deepvariant ?
written by Pierre Lindenbaum 17K
1 vote
1 reply
0 views
Answer: Answer: How can I speed up Deepvariant ?
written by Pierre Lindenbaum 17K
0 votes
1 reply
0 views
Comment: Comment: [HELP] AMR++ Host and Contaminant Removal, ERROR running $BWA mem
written by Pierre Lindenbaum 17K
0 votes
1 reply
0 views
Answer: Answer: [HELP] AMR++ Host and Contaminant Removal, ERROR running $BWA mem
written by Pierre Lindenbaum 17K
0 votes
0 replies
0 views
Comment: Comment: Why were no loci realigned after bcftools normalize?
written by Pierre Lindenbaum 17K
0 votes
0 replies
0 views
Comment: Comment: STAR number of input reads | 0
written by Pierre Lindenbaum 17K
0 votes
1 reply
0 views
Comment: Comment: STAR number of input reads | 0
written by Pierre Lindenbaum 17K
2 votes
1 reply
0 views
Comment: Comment: Can someone explain why are my Gnomad WGS AFs often 10x the Gnomad WES AF
written by Pierre Lindenbaum 17K
0 votes
0 replies
0 views
Comment: Comment: CIBERSORTx Fractions/HiRes: which mixture/signature-matrix combination is actual
written by Pierre Lindenbaum 17K
0 votes
1 reply
0 views
Comment: Comment: R1 / R2 are out of sync
written by Pierre Lindenbaum 17K
Latest awards to user
TODO: Awards