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SaltedPork
SaltedPork
Reputation:
170
Joined:
9.8 years ago
Last seen:
2.0 years ago
Location:
United Kingdom
Latest posts by user
0 votes
1 reply
701 views
Finding Insert in plasmid
bacteria assembly insert plasmid
updated by GenoMax GenoMax • written by SaltedPork SaltedPork
0 votes
2 replies
1.2K views
How can I convert this pairwise format to fasta?
fasta python bash
updated by GenoMax GenoMax • written by SaltedPork SaltedPork
0 votes
1 reply
882 views
Remove duplicates in multifasta, where entries are paired
bash python
updated by dthorbur dthorbur • written by SaltedPork SaltedPork
0 votes
0 replies
0 views
Comment: Comment: Tool for aligning short protein sequences
written by SaltedPork SaltedPork
0 votes
3 replies
1.7K views
Tool for aligning short protein sequences
protein alignment
updated by Andrzej Zielezinski Andrzej Zielezinski • written by SaltedPork SaltedPork
0 votes
0 replies
0 views
Answer: Answer: How to swap fasta entrys in a fasta file?
written by SaltedPork SaltedPork
0 votes
2 replies
1.1K views
How to swap fasta entrys in a fasta file?
awk fasta bash sed
updated by rpolicastro rpolicastro • written by SaltedPork SaltedPork
0 votes
1 reply
0 views
Comment: Comment: Bowtie2 not putting /2 /1 at the end of paired reads in SAM file
written by SaltedPork SaltedPork
0 votes
3 replies
1.5K views
Bowtie2 not putting /2 /1 at the end of paired reads in SAM file
alignment bowtie
updated by Istvan Albert Istvan Albert • written by SaltedPork SaltedPork
0 votes
1 reply
1.2K views
How to split fasta file by ID, making sure to keep two entrys in each file
fasta split seqkit bash
updated by Istvan Albert Istvan Albert • written by SaltedPork SaltedPork
0 votes
0 replies
1.2K views
Job: Senior Bioinformatician at Barts Health London
london bioinformatician senior
written by SaltedPork SaltedPork
0 votes
3 replies
1.7K views
Extract alignment in fasta format from BAM/SAM file
alignment bam
updated by Istvan Albert Istvan Albert • written by SaltedPork SaltedPork
0 votes
3 replies
1.7K views
Modifying FASTQ header
sed fastq awk
updated by Zhitian Wu • Zhitian Wu • written by SaltedPork SaltedPork
1 vote
4 replies
2.1K views
Automating pipeline with Parallel, read files in separate folders
fastq automation bash parallel
updated by ole.tange ole.tange • written by SaltedPork SaltedPork
0 votes
2 replies
1.4K views
Replace fasta ID with value from TSV file (sed with special characters)
sed
updated by cpad0112 cpad0112 • written by SaltedPork SaltedPork
1 vote
1 reply
1.0K views
Software/package that can visualise amino acid mutations against a reference genome
mutations visualisations
written by SaltedPork SaltedPork
0 votes
2 replies
1.8K views
How to create coverage graph/plot for an entire Illumina run
coverage r bam graph plot
written by SaltedPork SaltedPork
0 votes
1 reply
1.3K views
Convert the NT position in a VCF file to an AA position
ivar vcf gff
written by SaltedPork SaltedPork
0 votes
1 reply
0 views
Comment: C: Using GNU Parallel to read arguments into a bash script
written by SaltedPork SaltedPork
0 votes
3 replies
2.6K views
Using GNU Parallel to read arguments into a bash script
gnu parallel bash
written by SaltedPork SaltedPork
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