More posts like this
-
Which software should I use to perform Gene Enrichment Analysis for miRNA targets?
written by khq5801 1I have miRNA targets and I would like to perform Gene Enrichment Analysis. Kindly suggest robust software that would help me. Whether David or Shiny …
-
Joint variant calling on DeepVariant GVCFs using GATK GenotypeGVCFs
written by Matin 0Hi everyone I have a bunch of GVCF files generated by DeepVariant, but I want to use GATK's GenotypeGVCFs for joint variant calling on them …
-
Assembly of rna-long reads (NP)
written by bioinfo_ga 7Hi All I want to generate consensus sequence for rna data that are generated using nanopore platform.I have tries flye and rna-bloom tools but am …
-
Rare variants imputation
written by reds.nik 4Hi, I am currently working on rare variants association studies from whole genome seq data. I want to replicate my results in an array-genotyped cohort …
-
determination of alternate splicing events from assembled transcripts
written by blooming.daisy333 11hi all, I want to determine alternative splicing events for my assembled transcripts (i used strigTie for transcript assembly). my genome is novel for which …
-
Calculate the Quality of Bases
written by manojkumarbioinfo 10Hi, I want to calculate the quality of base using a bed file. for example **i have aligned my raw reads and i want to …
-
How to implement Yabi Importing tools in JSON format?
written by genomicswolf 2How to implement [Yabi][1] Importing tools in JSON? Where to find JSON signatures for BBMap, VCF and SAM tools and other bioinformatics software? Should I …
-
Alternative Visualisation Tools To Bar Charts For 16S Sequencing Data
written by as.williams 0<p>Hi everyone,</p> <p>I'm looking for a better way to create figures representing the different phyla in my samples other than simple excel bar charts. I've …
-
Preparing Zinc Ligand Database For Screening With Am1Bcc Charges
written by Sam 0<p>Hi, I want to screen a large ZINC database for ligands that fit in an enzyme active site. I have setup the SLIDE software to …
-
What Tools Do You Used For Joining Pictures Into A Panel For Publish?
written by chentong.biology 5<p>Hi, everyone,</p> <p>I am using Microsoft PPT to paste several pictures together as a panel. However, the resolution will be decreased when outputting to tiff …