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2
votes
2
replies
287
views
DepMap: siRNA and CRSIPR discrepancy
DepMap
updated 21 days ago by 82k • written 21 days ago by ★ 9.4k
0
votes
2
replies
243
views
Uniprotkb's Disease & Variants section out-of-date
Uniprotkb
updated 28 days ago by ★ 2.4k • written 29 days ago by ★ 9.4k
1
vote
3
replies
250
views
R/python script to extract Subcellular locations (Compartments) from Genecards?
Genecards
updated 29 days ago by 161k • written 29 days ago by ★ 9.4k
1
vote
1
reply
193
views
R/Python script to collect allele frequency for batch of SNPs in gnomAD database
gnomAD
28 days ago by Shicheng Guo ★ 9.4k
0
votes
0
replies
115
views
R/Python function to retrieve interacted proteins from HPA database
HPA
29 days ago by Shicheng Guo ★ 9.4k
0
votes
1
reply
241
views
Data table for LOEUF loss-of-function observed/expected upper bound fraction
LOEUF
updated 29 days ago by 161k • written 4 weeks ago by ★ 9.4k
0
votes
1
reply
316
views
Tissue specific mRNA expression dataset in human and mouse
tissue-specificity
updated 4 weeks ago by 43k • written 5 weeks ago by ★ 9.4k
1
vote
0
replies
197
views
Synthetic lethality and cancer database
interaction lethal synthetic
5 weeks ago by Shicheng Guo ★ 9.4k
0
votes
0
replies
123
views
Public datasets for genome-wide level mRNA-protein correlation calculation?
correlation protein mRNA
21 days ago by Shicheng Guo ★ 9.4k
2
votes
1
reply
250
views
Disease Prevalence Database/Disease Incidence Database
prevalence
updated 6 weeks ago by 43k • written 6 weeks ago by ★ 9.4k
0
votes
0
replies
184
views
Computational Package to engage Type 2 Diabetes Knowledge Portal (T2DKP)
workflow Package
7 weeks ago by Shicheng Guo ★ 9.4k
1
vote
3
replies
388
views
Mathematical/Statistical models to predict mRNA half-life
mRNA half-life
updated 7 weeks ago by 19k • written 7 weeks ago by ★ 9.4k
3
votes
4
replies
355
views
Receptors with internalization capability
receptor
7 weeks ago by Shicheng Guo ★ 9.4k
1
vote
2
replies
436
views
Where to download excel file to include major human disease, prevalence and incidence?
Disease-Burden
updated 4 months ago by 43k • written 4 months ago by ★ 9.4k
0
votes
4
replies
5.2k
views
6 follow
rsq Filter in Michigan imputation Server
rsq michigan
updated 9 months ago by • 0 • written 4.7 years ago by ★ 9.4k
6
votes
3
replies
15k
views
fastq-dump split-spot and skip-technical
fastq-dump split-spot skip-technical
updated 15 months ago by • 0 • written 8.2 years ago by ★ 9.4k
0
votes
0
replies
345
views
The best MHC class II epitope prediction approach
epitope
19 months ago by Shicheng Guo ★ 9.4k
0
votes
0
replies
368
views
Best Performance Monitor for Linux compared with nmon ?
nmon
19 months ago by Shicheng Guo ★ 9.4k
1
vote
0
replies
364
views
Method/approach/algorithm for multi-omics integrative analysis for mechanism insights
integrative gwas omics insights
22 months ago by Shicheng Guo ★ 9.4k
1
vote
1
reply
537
views
Large-scale public data for cancer cell line genomic data (SNP, mutation or CNV)
snp
updated 23 months ago by 4.6k • written 23 months ago by ★ 9.4k
0
votes
0
replies
504
views
Model to predict the mutation effect to COVID19 transmissibility
transmissibility covid
23 months ago by Shicheng Guo ★ 9.4k
2
votes
1
reply
551
views
Downstream validation to differential alternative splicing analysis from RNA-seq
splicing differential
updated 23 months ago by 13k • written 23 months ago by ★ 9.4k
3
votes
1
reply
554
views
Server Vendors to provide bioinformatics talents
vendor
updated 23 months ago by 142k • written 23 months ago by ★ 9.4k
5
votes
3
replies
1.0k
views
"moving average" function for "coverage" signal in bed files?
bedtools
updated 24 months ago by ▴ 520 • written 24 months ago by ★ 9.4k
1
vote
1
reply
682
views
eagle2 + minimac4 script for phasing and imputation
eagle2 minimac4
updated 2.2 years ago by ▴ 190 • written 2.2 years ago by ★ 9.4k
1
vote
0
replies
436
views
Advantage of nCounter PanCancer IO 360™ Panel
IO Panel PanCancer 360 nCounter
2.4 years ago by Shicheng Guo ★ 9.4k
2
votes
1
reply
1.5k
views
How to understand Structural Variation in bedpe format?
SV bedpe
updated 2.4 years ago by • 0 • written 3.5 years ago by ★ 9.4k
0
votes
0
replies
630
views
heterozygous SNV AB>0.15, heterozygous indel<0.20 in UKB-WES
UKB
2.5 years ago by Shicheng Guo ★ 9.4k
1
vote
0
replies
548
views
1,135 parent-offspring pairs, 3,855 full-sibling pairs in UKB
UK UKB biobank
2.5 years ago by Shicheng Guo ★ 9.4k
1
vote
0
replies
562
views
comprehensive discussion to Phenotypic and Genotypic Matchmaking tools
phenotype genotype
2.5 years ago by Shicheng Guo ★ 9.4k
1
vote
1
reply
716
views
Best RNA-seq downstream visualization workflow
snakemake RNAseq nextflow
2.5 years ago by Shicheng Guo ★ 9.4k
0
votes
0
replies
427
views
R package to integrate OMIM, Orphanet and Decipher
Decipher OMIM R Orphanet
2.5 years ago by Shicheng Guo ★ 9.4k
2
votes
3
replies
698
views
refseq stopped to update gene summary
refseq
updated 2.5 years ago by 142k • written 2.5 years ago by ★ 9.4k
1
vote
1
reply
681
views
Genetic variation calling (SNPs) from bulk RNA-seq dataset
RNAseq SNP
updated 2.5 years ago by 100k • written 2.5 years ago by ★ 9.4k
0
votes
1
reply
1.7k
views
Consensus genotype of MUTECT1, MUTECT2, Varscan, Muse and Somaticsniper
consensus mutation bcftools
updated 2.6 years ago by • 0 • written 4.9 years ago by ★ 9.4k
1
vote
2
replies
834
views
How to download GTEx figure from USCS genome browser
UCSC GTEx
updated 2.7 years ago by ▴ 650 • written 2.8 years ago by ★ 9.4k
1
vote
1
reply
686
views
Human tissue expression dataset except GTEx
GTEx
updated 2.7 years ago by ▴ 70 • written 2.7 years ago by ★ 9.4k
0
votes
0
replies
401
views
Pan-cancer over-expressed or down-regulated gene list
TCGA expression
2.8 years ago by Shicheng Guo ★ 9.4k
10
votes
6
replies
14k
views
6 follow
How to download dbSNP153 vcf files in hg19/GRCH37 version
dbsnp153 vcf
updated 18 months ago by ▴ 530 • written 4.7 years ago by ★ 9.4k
1
vote
1
reply
1.2k
views
ChEMBL ID to Ensembl ID
ChEMBL Ensembl
updated 2.8 years ago by ★ 1.0k • written 2.8 years ago by ★ 9.4k
0
votes
0
replies
427
views
GPSPROT image/network download with script
GPSPROT
2.9 years ago by Shicheng Guo ★ 9.4k
0
votes
2
replies
763
views
Best method of integrative analysis for GWAS and differential expression data
GWAS
2.9 years ago by Shicheng Guo ★ 9.4k
0
votes
2
replies
808
views
eQTL Catalogue Browser: limitation
Catalogue eQTL
2.9 years ago by Shicheng Guo ★ 9.4k
0
votes
0
replies
534
views
NDEx database data download
ndex database pathway
3.0 years ago by Shicheng Guo ★ 9.4k
0
votes
1
reply
649
views
Conflict result between RNA-seq and Western-Blot
RNAseq protein
updated 3.0 years ago by ★ 2.9k • written 3.0 years ago by ★ 9.4k
0
votes
1
reply
556
views
Given a disease name, which R package can return relevant tissues of pathogenic?
pathogenic tissue-of-disease
3.0 years ago by Shicheng Guo ★ 9.4k
2
votes
1
reply
794
views
Phenotype Enrichment Analysis vs Gene Enrichment Analysis
enrichment gene phenotype
updated 3.0 years ago by 54k • written 3.0 years ago by ★ 9.4k
0
votes
0
replies
447
views
Catalog Database to TF binding site
TFBS
3.0 years ago by Shicheng Guo ★ 9.4k
0
votes
1
reply
857
views
Instrumental Variables and confounder in Mendelian Randomization
Variables Mendelian randomization Instrumental
3.1 years ago by Shicheng Guo ★ 9.4k
0
votes
1
reply
738
views
Best practice to integrate OMIM data into bioinformation analysis pipeline
OMIM pipeline
3.3 years ago by Shicheng Guo ★ 9.4k
272 results • Page 1 of 6
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