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1,000 results • Page
1 of 20
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0
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107
views
Forum:
Field of Study in Computational Biology
Genomics
Computational-Biology
PhD
updated 21 hours ago by
Ram
43k • written 1 day ago by
Mohammed
• 0
1
vote
3
replies
382
views
Forum:
Development plan for a bioinformatics database developer/coder
developer
4 days ago by
pixie@bioinfo
★ 1.5k
7
votes
8
replies
499
views
Forum:
Bioinformatics career transition
career
forum
updated 4 days ago by
jared.andrews07
★ 16k • written 4 days ago by
jevill17
▴ 20
4
votes
2
replies
380
views
Forum:
Exploring Amino Acid Patterns in Proteins Through N-gram Analysis
protein
CAFA5
10 days ago by
Anatoly A.
▴ 10
6
votes
6
replies
670
views
Forum:
You have 3 days of zero obligations and expansive resources. What are you building?
hypothetical
thought-experiment
12 days ago by
jared.andrews07
★ 16k
0
votes
0
replies
113
views
Forum:
What other data types and pipelines you would like to see from the Genomics Data Commons (GDC)
gdc
tcga
genomics-data-commons
updated 14 days ago by
Ram
43k • written 15 days ago by
Zhenyu Zhang
★ 1.1k
0
votes
2
replies
272
views
Forum:
What's the state of the art in bacterial whole genome alignment?
whole
genome
alignment
mauve
14 days ago by
Dave Carlson
★ 1.6k
31
votes
12
replies
773
views
7 follow
Forum:
Nextflow and self-made pipelines opinion
nextflow
pipeline
data-analysis
19 days ago by
karlaarz
▴ 90
5
votes
4
replies
453
views
Forum:
Would reaching out to local labs and startups help with my career transition?
career
volunteering
updated 25 days ago by
GenoMax
140k • written 25 days ago by
Mango
▴ 10
1
vote
2
replies
298
views
Forum:
Exploring Career Reentry: Challenges and opportunities for Women After Maternity and Childcare Breaks
Maternity
Career-Gap
career-reentry
updated 26 days ago by
ATpoint
81k • written 27 days ago by
ashaneev07
▴ 20
8
votes
7
replies
685
views
6 follow
Forum:
Tower Server configuration for NGS data analysis
NGS
updated 28 days ago by
emmanouil.a
▴ 120 • written 6 weeks ago by
harasharan
• 0
1
vote
0
replies
220
views
Forum:
list of bioinformatics tools in cancer genomics
mutations
CNA
cancer
genomics
LOH
updated 4 weeks ago by
Pierre Lindenbaum
160k • written 4 weeks ago by
Bogdan
★ 1.4k
4
votes
2
replies
308
views
Forum:
bulk seq vs. sc-seq
scATAC-seq
ATAC-seq
scRNAseq
RNAseq
updated 5 weeks ago by
dsull
★ 5.6k • written 5 weeks ago by
SebKittelmann
▴ 10
8
votes
6
replies
2.8k
views
Forum:
Demonstrating Exponential Growth In Pre-School
education
written 10.1 years ago by
Asaf
10k
0
votes
0
replies
147
views
Forum:
tutorial for carrier screening analyses?
carrier-screening
updated 7 weeks ago by
Ram
43k • written 7 weeks ago by
Akos
▴ 20
2
votes
3
replies
373
views
Forum:
My Project
Project
CLI
MD-Simulations
Molecular-docking
7 weeks ago by
Ajay A Shettigar
• 0
17
votes
11
replies
842
views
Forum:
How to overcome the imposter syndrome in bioinformatics?
advice
8 weeks ago by
sil_bioinfo
▴ 40
10
votes
7
replies
2.0k
views
Forum:
How to learn bioinformatics?
learning
updated 8 weeks ago by
Samuel Lampa
★ 1.3k • written 22 months ago by
sakichwan
▴ 20
26
votes
27
replies
1.8k
views
10 follow
Forum:
Determining computer time required
computer
hpc
time
updated 8 weeks ago by
dsull
★ 5.6k • written 9 weeks ago by
Rozita
▴ 40
7
votes
6
replies
649
views
Forum:
where to work as a bioinformatician (NGS/IA)
employment
omics
ia
ngs
updated 9 weeks ago by
Ram
43k • written 9 weeks ago by
Petur
▴ 20
21
votes
12
replies
3.4k
views
Forum:
How to Use Biostars Part-3: Formatting Text and Using GitHub Gists
meta
how-to
documentation
8 weeks ago by
Ram
43k
2
votes
1
reply
313
views
Forum:
Cataloguing available spatial transcriptomics tools, then linking them together into a workflow?
cytassist
transcriptomics
nanostring
xenium
visium
9 weeks ago by
LauferVA
4.0k
49
votes
20
replies
1.9k
views
10 follow
Forum:
First experiences matter
first-time
tolerance
updated 10 weeks ago by
Michael Love
★ 2.6k • written 10 weeks ago by
Mensur Dlakic
★ 26k
4
votes
3
replies
676
views
Forum:
How to get started in bioinformatics
students
updated 9 weeks ago by
Ram
43k • written 11 weeks ago by
Soidihane
▴ 10
2
votes
2
replies
529
views
Forum:
Do batches contain biological variations in omics data (RNAseq or scRNAseq)?
combat
single-cell
omics
batch
rnaseq
updated 11 weeks ago by
Ram
43k • written 11 weeks ago by
cwwong13
▴ 40
0
votes
2
replies
1.9k
views
Forum:
I’m considering a career transition from software engineering to bioinformatics. Is it a good fit for me?
career
updated 11 weeks ago by
GenoMax
140k • written 11 weeks ago by
Mango
▴ 10
5
votes
3
replies
508
views
Forum:
Binning the rare biosphere
metagenomics
soil
assembly
techniques
binning
updated 3 months ago by
Mensur Dlakic
★ 26k • written 3 months ago by
Konstantin
▴ 20
6
votes
2
replies
578
views
Forum:
how to start Bioinformatics?
basics
updated 3 months ago by
Mensur Dlakic
★ 26k • written 3 months ago by
sajibsuvo70
• 0
19
votes
5
replies
1.0k
views
6 follow
Forum:
What Are The Most Influential Bioinformatics/Computational Biology Papers Of 2023?
genomics
snps
survey
papers
3 months ago by
Raony Guimarães
★ 1.4k
4
votes
6
replies
839
views
6 follow
Forum:
Bioinformatics: what do you think of it in the next 20 years?
future
updated 3 months ago by
Ram
43k • written 3 months ago by
Daniel
• 0
1
vote
1
reply
440
views
Forum:
want to work in open source project/project in bioinformatics
project
updated 3 months ago by
Ram
43k • written 3 months ago by
Afeef
• 0
3
votes
5
replies
946
views
Forum:
Current Trends in Bioinformatics
structural-bioinformatics
updated 3 months ago by
Ram
43k • written 4 months ago by
Paulo
• 0
21
votes
11
replies
2.3k
views
6 follow
Forum:
Rust bioinformatics projects ideas
projects
scRNA-seq
RNA-seq
Rust
updated 3 months ago by
Jeremy Leipzig
22k • written 12 months ago by
bompipi95
▴ 140
176
votes
46
replies
18k
views
26 follow
Forum:
Crac: Funny And/Or Weird Names For Bioinformatics Tools
humor
4 months ago by
Istvan Albert
100k
3
votes
2
replies
579
views
Forum:
RNA-Seq data analysis - question
Python
RNA-Seq
R
updated 4 months ago by
fturner
▴ 10 • written 4 months ago by
sil_bioinfo
▴ 40
0
votes
0
replies
336
views
Forum:
How to learn bioinformatics online?
self-education
education
learning
updated 4 months ago by
Ram
43k • written 4 months ago by
Brian Rey | BioLearn
• 0
6
votes
5
replies
2.2k
views
Forum:
Maintaning internal or private installation of Biostar or a similar Q&A site
Biostars
4 months ago by
tshtatland
▴ 190
7
votes
9
replies
1.3k
views
6 follow
Forum:
Mentor for a beginner bioinformatics student
project
mentor
4 months ago by
UT_FAN
▴ 40
0
votes
0
replies
382
views
Forum:
Steps after doublet detection in single cell data
scRNA
doublet
5 months ago by
ishwarvh
• 0
0
votes
0
replies
308
views
Forum:
Automated Checks And QA
retrospective
5 months ago by
Sasha
▴ 830
7
votes
13
replies
1.2k
views
Forum:
How do you validate and verify your pipeline's software updates?
Validation
Verification
Quality-Assurance
updated 5 months ago by
Ram
43k • written 5 months ago by
kieran
▴ 10
21
votes
7
replies
11k
views
Forum:
Bioinformatics short paper journal resource [software/webapps/database]
journal
software
webapp
updated 5 months ago by
Gennady Khvorykh
▴ 100 • written 8.0 years ago by
Sukhi Singh
11k
3
votes
3
replies
809
views
Forum:
Importance of Data Structures for Bioinformatics?
data-structures
updated 5 months ago by
Ram
43k • written 6 months ago by
S
• 0
19
votes
14
replies
1.9k
views
Forum:
What is the amount of sequencing data produced annually?
data
research
sequencing
updated 6 months ago by
Jeremy Leipzig
22k • written 6 months ago by
vincenthus
▴ 70
19
votes
10
replies
1.4k
views
Forum:
Pain points using commercial clouds
gpt
tinybio
updated 6 months ago by
vincenthus
▴ 70 • written 6 months ago by
Sasha
▴ 830
9
votes
6
replies
1.8k
views
6 follow
Forum:
GTF files from Ensembl Releases 105 and 106 unsorted
Ensembl
bug
GTF
updated 6 months ago by
ATpoint
81k • written 16 months ago by
dlaehnemann
▴ 30
3
votes
2
replies
561
views
Forum:
How to contribute to the next edition of Biostars Handbook
handbook
updated 6 months ago by
Ram
43k • written 6 months ago by
Fouad
▴ 20
3
votes
6
replies
1.4k
views
6 follow
Forum:
Is Bioinformatics a Professional Degree?
career
degree
6 months ago by
anasjamshed
▴ 120
2
votes
5
replies
899
views
6 follow
Forum:
Biostar as a next generation version
meta
mobile-app
updated 5 months ago by
Ram
43k • written 6 months ago by
rj.rezwan
• 0
2
votes
9
replies
1.1k
views
Forum:
open source projects looking for contributors
open-source
updated 6 months ago by
vincenthus
▴ 70 • written 6 months ago by
claudiofr
▴ 20
1,000 results • Page
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Recent Votes
Comment: Single cluster spanning in different locations in UMAP in scRNAseq data
UniprotKB BLAST pipeline troubles
UniprotKB BLAST pipeline troubles
Comment: UniprotKB BLAST pipeline troubles
Answer: UniprotKB BLAST pipeline troubles
Cross-referencing Id from Swiss-Prot/UniProtKB human reference proteome to Ensembl Genes
Answer: Cross-referencing Id from Swiss-Prot/UniProtKB human reference proteome to Ensem
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Popular Question
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Bioinfo
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aUser
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Recent Replies
Comment: Haddock 2.4
by
dthorbur
★ 1.6k
You are only focusing on a single value. There are numerous descriptive statistics reported after a run. Together they describe the fit and…
Comment: Single cluster spanning in different locations in UMAP in scRNAseq data
by
ATpoint
81k
It means that there is a disagreement between UMAP and clustering algorithm, but since UMAP is mostly just visualization you could ignore i…
Comment: Ribo and RNA seq analysis
by
Jack Tierney
▴ 350
Hi Manu Ayllon, It is difficult to advise as I am unclear on the goal of your project. I will tell you what I understand and you can co…
Answer: Ribo and RNA seq analysis
by
Manu Ayllon
• 0
I got it making use of blastn, creating first a database with the RNA sequences and doing blast with the Ribo-seq sequences as query. The p…
Comment: Deeptools scale issue for plotHeatmap
by
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Hi Devon, Thanks a lot for the reply. DNA methylation file has 19466838 lines while domains has 92409 lines.
Answer: why there is an asterisk symbol at the end of each proteins sequences offasta fi
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Juke34
8.5k
It corresponds to stop codon but in theory GTF format does not have stop codon in CDS. Keep in mind that it exists stop codon reading th…
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by
ATpoint
81k
That is an entirely different analysis and depends on the testing Framework. If you use the commonly-used Wilcox test or something like lim…
Comment: Haddock 2.4
by
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• 0
i have three different runs with haddock score of -75, -68, -61 . Which one is better among these( molecule 1 is same in all three ,only mo…
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by
dhruti
• 0
@dodausp Did you ever find a reason for this? I am having the same problem
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Corentin
▴ 600
Sex chromosomes are always a bit tricky to handle in associations studies. How many male cases and male controls you have for this phenoty…
Comment: Beagle Phasing and Imputation
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Duarte Molha
▴ 240
Hi @lchart Thank you for your answer. I coded my male sample as biallelelic homozygous as i was aware of limitations for allosomes.…
Comment: error in wigToBigWig while converting mappability to bedgraph
by
Dora
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And I also change the chrom name in the .sizes file. That works perfect. Thank you very much!
Comment: scRNAseq normalization
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sarahmanderni
▴ 100
Thanks for the response! I also was wondering to ask if you have found the log-norm also working fine in terms of downstream analysis like …
Answer: Subsetting Seurat object based on list of cell barcodes
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fracarb8
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`subset(seurat.obj_combined, cells = all_good_cells_rhemac10$V1)` You need to pass `cells` not `subset`. From the documentation: sub…
Answer: TCGA UUIDS to TCGA barcode (SampleID) in R
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Great solutions on this page, the old web page has been replace with new one, so you need to use the new link, and it will work: old lin…
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