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Bogdan
Bogdan
Reputation:
1,430
Joined:
14.1 years ago
Last seen:
1.5 years ago
Location:
Palo Alto, CA, USA
Google Scholar:
1l8qSO4AAAAJ

about me

Latest posts by user
0 votes
1 reply
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Comment: Comment: bioinformatics tutorial on Oxford Nanopore Technologies
written by Bogdan Bogdan
0 votes
4 replies
1.6K views
bioinformatics tutorial on Oxford Nanopore Technologies
oxford nanopore
updated by GenoMax GenoMax • written by Bogdan Bogdan
1 vote
0 replies
903 views
Forum: list of bioinformatics tools in cancer genomics
mutations cna cancer genomics loh
updated by Pierre Lindenbaum Pierre Lindenbaum • written by Bogdan Bogdan
0 votes
0 replies
671 views
filtering SNV/INDEL in tumor-only WGS samples
tumor-only samples
written by Bogdan Bogdan
0 votes
0 replies
1.7K views
filtering variants in a Strelka2 VCF file based on AD and AF
filter vcf
written by Bogdan Bogdan
0 votes
0 replies
760 views
Copy Number Alteration and Loss or Heterozygosity
loh cna copy-number
updated by Ram Ram • written by Bogdan Bogdan
0 votes
1 reply
0 views
Comment: Comment: fitting a copy number profile to know CNV signatures
written by Bogdan Bogdan
1 vote
3 replies
1.9K views
fitting a copy number profile to know CNV signatures
cnv copy number loh cna
updated by LauferVA LauferVA • written by Bogdan Bogdan
0 votes
0 replies
829 views
allelic copy number variation
loh cna cnv copy-number
updated by Ram Ram • written by Bogdan Bogdan
0 votes
0 replies
1.0K views
alelle - specific CNA/LOH
cancer cnv genomics loh cna
written by Bogdan Bogdan
0 votes
0 replies
674 views
network alignment and network regression
network
written by Bogdan Bogdan
1 vote
0 replies
865 views
CNA/LOH caller on WGS data and chromosomal instability index
cna cnv
written by Bogdan Bogdan
0 votes
0 replies
1.2K views
downloading the VCF files of CCLE project (or cancer genomics WGS)
cancer genomics wgs ccle vcf
written by Bogdan Bogdan
0 votes
0 replies
723 views
packages to detect chromoanagenesis phenomena in germline or cancer genomes
shatterproof
written by Bogdan Bogdan
0 votes
0 replies
0 views
Answer: Answer: How does edgeR do ERCC spike-in normalization?
written by Bogdan Bogdan
0 votes
0 replies
621 views
clustering of genome segments
cancer genomics epigenetics
written by Bogdan Bogdan
0 votes
0 replies
0 views
Comment: Comment: wig2bed and counting the reads in the peaks
written by Bogdan Bogdan
1 vote
2 replies
1.6K views
wig2bed and counting the reads in the peaks
bedtools chip-seq deeptools bedops
updated by Ram Ram • written by Bogdan Bogdan
0 votes
1 reply
2.3K views
normalize and compare bigwig files
bigwig
updated by Matthias Zepper Matthias Zepper • written by Bogdan Bogdan
0 votes
1 reply
1.2K views
calling peaks in ChIP-seq datasets from bedgraph files
chip-seq macs2
updated by Marco Pannone • Marco Pannone • written by Bogdan Bogdan
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