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Jautis
Jautis
Reputation:
580 (Trusted)
Joined:
11.6 years ago
Last seen:
2.4 years ago
Location:
United States
Latest posts by user
3 votes
0 replies
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Answer: Answer: LD-prune variants while maintaining a list of SNPs
written by Jautis 58
1 vote
1 reply
1.3K views
LD-prune variants while maintaining a list of SNPs
snp vcf plink filtering independent
updated by zx8754 1.2K • | written by Jautis 58
0 votes
0 replies
959 views
Troubleshooting error with BSmooth: `error in serialize(data, node$con)`
r sequencing methylation bsseq
updated by Ram 4.5K • | written by Jautis 58
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Comment: Comment: Match variants for allele frequency, LD score, and other features
written by Jautis 58
0 votes
0 replies
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Comment: Comment: bcftools mipileup error: format error, unexpected A at line 1
written by Jautis 58
1 vote
0 replies
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Answer: Answer: improving genome sequence read depth and confidence by combining sequences from
written by Jautis 58
1 vote
1 reply
794 views
Match variants for allele frequency, LD score, and other features
snp
written by Jautis 58
0 votes
1 reply
768 views
Extract read position where a base is covered, and the allele at that base
samtools bam bwa
updated by Ram 4.5K • | written by Jautis 58
0 votes
0 replies
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Comment: Comment: How to download dbSNP153 vcf files in hg19/GRCH37 version
written by Jautis 58
0 votes
1 reply
972 views
Extract mapped SE and properly paired PE reads from a bam file
properly single bam end mapped paired
updated by jv 187 • | written by Jautis 58
0 votes
1 reply
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Answer: Answer: My PCA plot looks good but i don't have differentially expressed genes
written by Jautis 58
2 votes
0 replies
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Comment: Comment: Should I normalize the data before or after filtering to a particular cell type?
written by Jautis 58
4 votes
0 replies
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Comment: Comment: Differntial Gene Expression analysis
written by Jautis 58
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Comment: Comment: SNPs with multiple nucleotides
written by Jautis 58
2 votes
1 reply
0 views
Answer: Answer: SNPs with multiple nucleotides
written by Jautis 58
0 votes
1 reply
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Comment: Comment: Capture Hi-C processing yields sparse matrices
written by Jautis 58
0 votes
0 replies
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Comment: Comment: Alternatives to TMM normalization
written by Jautis 58
1 vote
4 replies
1.9K views
Alternatives to TMM normalization
voom expression r limma
written by Jautis 58
1 vote
0 replies
0 views
Answer: Answer: How can I colour UMAP by sample batches
written by Jautis 58
0 votes
0 replies
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Comment: Comment: single cell RNA-seq: Is there a way to tell if one dataset is more similar to an
written by Jautis 58
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