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hamarillo
hamarillo
Reputation:
80
Joined:
10.0 years ago
Last seen:
1.4 years ago
Location:
Mexico
Latest posts by user
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Answer: Answer: Hi-C interactions significance
written by hamarillo • hamarillo
1 vote
0 replies
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Comment: Comment: error report：while running fastq-dump
written by hamarillo • hamarillo
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3 replies
1.7K views
temp directory as output in snakemake
directory temp snakemake
updated by Jesse • Jesse • written by hamarillo • hamarillo
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0 replies
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Comment: Comment: genefu for PAM50 prediction
written by hamarillo • hamarillo
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0 replies
496 views
Merging Hi-C datasets originating from experiments using different enzymes
enzymes hi-c
updated by Ram Ram • written by hamarillo • hamarillo
1 vote
0 replies
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Answer: Answer: ENCODE Hi-C FASTQ files are SINGLE end
written by hamarillo • hamarillo
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2 replies
2.4K views
ENCODE Hi-C FASTQ files are SINGLE end
fastq layout encode hi-c
updated by Yihang • Yihang • written by hamarillo • hamarillo
1 vote
0 replies
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Answer: Answer: Docker image to use Rscript
written by hamarillo • hamarillo
1 vote
3 replies
2.2K views
Docker image to use Rscript
snakemake docker rscript
written by hamarillo • hamarillo
0 votes
2 replies
1.5K views
sequencing machines output files layout
layout fastq sequencing
updated by GenoMax GenoMax • written by hamarillo • hamarillo
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1 reply
942 views
How many FASTQ files does one SRA Run correspond to?
fastq sra
updated by Ram Ram • written by hamarillo • hamarillo
0 votes
1 reply
991 views
Analytical criteria to say a transcript is expressed in single-cell
counts scrna-seq single-cell expression-matrix
updated by Ram Ram • written by hamarillo • hamarillo
1 vote
3 replies
1.9K views
trimmomatic and STAR alignments
trimmomatic star rnaseq sequencing reads
updated by stuart archer • stuart archer • written by hamarillo • hamarillo
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1 reply
963 views
Difference between sratools and sratoolkit
sratoolkit sratools sra sequencing fastq
updated by Ram Ram • written by hamarillo • hamarillo
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0 replies
1.1K views
valid UMIs in STARsolo output?
starsolo single-cell umis rna-seq
written by hamarillo • hamarillo
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1 reply
1.9K views
Seurat dotplot
seurat features dotplot variable markers
updated by tomas4482 • tomas4482 • written by hamarillo • hamarillo
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2 replies
1.1K views
Should one use cell cycle regression on single-cell data from PBMCs?
cycle regression cell single pbmcs seurat
updated by ATpoint ATpoint • written by hamarillo • hamarillo
0 votes
1 reply
1.3K views
snakemake rule ambiguity
ambiguity snakemake
updated by Wayne Wayne • written by hamarillo • hamarillo
0 votes
1 reply
6.3K views
Seurat object data vs counts
seurat
updated by rpolicastro rpolicastro • written by hamarillo • hamarillo
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1 reply
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Comment: Comment: scRNA-seq: Which is the best method for computing the % of similarity between tw
written by hamarillo • hamarillo
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