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stuart archer
stuart archer
Reputation:
180
Joined:
6.8 years ago
Last seen:
1 week ago
Location:
Australia
Latest posts by user
1 vote
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Comment: Comment: Can someone explain why are my Gnomad WGS AFs often 10x the Gnomad WES AF
written by stuart archer • stuart archer
2 votes
3 replies
168 views
Can someone explain why are my Gnomad WGS AFs often 10x the Gnomad WES AF
frequencies gnomad allele
updated by Jeremy Leipzig Jeremy Leipzig • written by stuart archer • stuart archer
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Answer: Answer: Ribo-seq Trimming Issue: Massive Read Loss in Paired-end Mode
written by stuart archer • stuart archer
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Answer: Answer: How to trim added sequences by library generation using SMART-ChIP-seq
written by stuart archer • stuart archer
1 vote
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Comment: Comment: trimmomatic and STAR alignments
written by stuart archer • stuart archer
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Answer: Answer: TCGA library type information
written by stuart archer • stuart archer
4 votes
1 reply
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Answer: Answer: Adaptor trimming (best tools)?
written by stuart archer • stuart archer
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Comment: Comment: How to trim the adapter from paired end RNA-seq data
written by stuart archer • stuart archer
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Comment: Comment: About trimming adapter and primer sequences from Illumina reads
written by stuart archer • stuart archer
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Comment: Comment: Trimming of reverse complement primers
written by stuart archer • stuart archer
2 votes
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Comment: Comment: Validate and Trim 3'adapter(P-UCGUAUGCCGUCUUCUGCUUGUidT)
written by stuart archer • stuart archer
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Comment: Comment: Cutadapt Trimming and Filtered smaller than expected number of reads
written by stuart archer • stuart archer
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Comment: C: Does trimming RNA-Seq reads affect the differentially expressed genes?
written by stuart archer • stuart archer
3 votes
0 replies
1.4K views
Tool: Trimviz, a lightweight QC tool to assess impact of read-trimming and aligner soft-clipping
alignment trimming qc clipping fastq
updated by Ram Ram • written by stuart archer • stuart archer
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Comment: C: Keeping paired reads together when sorting BAM file by name
written by stuart archer • stuart archer
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2 replies
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Comment: C: BWA mem bam output name sorted
written by stuart archer • stuart archer
1 vote
1 reply
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Comment: C: Creating a Contingency Table (Gene Absence Presence)
written by stuart archer • stuart archer
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1 reply
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Comment: C: Creating a Contingency Table (Gene Absence Presence)
written by stuart archer • stuart archer
0 votes
3 replies
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Comment: C: Creating a Contingency Table (Gene Absence Presence)
written by stuart archer • stuart archer
3 votes
1 reply
0 views
Answer: A: Creating a Contingency Table (Gene Absence Presence)
written by stuart archer • stuart archer
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