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tomas4482
tomas4482
Reputation:
430
Joined:
5.0 years ago
Last seen:
1.6 years ago
Location:
Hong Kong
Latest posts by user
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Answer: Answer: how can i download human ribosomal reference ?
written by tomas4482 • tomas4482
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Answer: Answer: Correct VCF header
written by tomas4482 • tomas4482
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1 reply
1.2K views
Don't understand three modes of TCGA STAR 2-pass
gdc rna-seq tcga
updated by Zhenyu Zhang Zhenyu Zhang • written by tomas4482 • tomas4482
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Comment: Comment: ascp Session stop time out
written by tomas4482 • tomas4482
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1.5K views
ascp Session stop time out
ena aspera
updated by GenoMax GenoMax • written by tomas4482 • tomas4482
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Comment: Comment: Seurat not creating nCount_RNA and nFeature_RNA
written by tomas4482 • tomas4482
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Comment: Comment: Subset VCF to exon region but still get intron_variant annotation
written by tomas4482 • tomas4482
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Comment: Comment: Subset VCF to exon region but still get intron_variant annotation
written by tomas4482 • tomas4482
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4 replies
1.5K views
Subset VCF to exon region but still get intron_variant annotation
ensembl vcf vep vcftools
updated by rfran010 • rfran010 • written by tomas4482 • tomas4482
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Comment: Comment: Ensembl IDs <-> Gene Symbols mapping -- Using org.Hs.eg.db, biomaRt or EnsDb.Hsa
written by tomas4482 • tomas4482
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1 reply
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Answer: Answer: Ensembl IDs <-> Gene Symbols mapping -- Using org.Hs.eg.db, biomaRt or EnsDb.Hsa
written by tomas4482 • tomas4482
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Comment: Comment: What does an amino acid sequence that does not start with methionine mean?
written by tomas4482 • tomas4482
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Comment: Comment: Problems when trying to use ensembl-vep
written by tomas4482 • tomas4482
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601 views
Producing sequence for splicing isoforms
isoform rmats splicing alternative spladder
written by tomas4482 • tomas4482
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Comment: Comment: could not find function "gseGO" in ClusterProfiler
written by tomas4482 • tomas4482
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Answer: Answer: Somatic variant calling mutect2 ctDNA liquid biopsy
written by tomas4482 • tomas4482
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Answer: Answer: How can I make a similar mutated gene expression figure with TCGA data
written by tomas4482 • tomas4482
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Comment: Comment: Seurat Metadata to Dataframe Manipulation
written by tomas4482 • tomas4482
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Answer: Answer: Seurat Metadata to Dataframe Manipulation
written by tomas4482 • tomas4482
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Comment: Comment: Is it possible to split BAM without sorting it?
written by tomas4482 • tomas4482
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