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samuel.a.odonnell
samuel.a.odonnell
Reputation:
860
Joined:
8.5 years ago
Last seen:
3 days ago
Location:
Paris
Twitter:
SAMtoBAM
Latest posts by user
2 votes
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Answer: Answer: Struggling to download using SRA toolkit from an Accession list
written by samuel.a.odonnell samuel.a.odonnell
1 vote
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Comment: Comment: calculate the median k-mer coverage from a genomic BAM file command- linux
written by samuel.a.odonnell samuel.a.odonnell
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Comment: Comment: Experienced bioinformatician, zero UK interviews, what am I missing?
written by samuel.a.odonnell samuel.a.odonnell
1 vote
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Comment: Comment: sample size for pangenome project
written by samuel.a.odonnell samuel.a.odonnell
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Comment: Comment: I built BioMark — like Geekbench but for bioinformatics. Tells you honestly if y
written by samuel.a.odonnell samuel.a.odonnell
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Comment: Comment: A genome impossible to be assembled
written by samuel.a.odonnell samuel.a.odonnell
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Comment: Comment: Gold standard / Phylogenetics for intertidal fish
written by samuel.a.odonnell samuel.a.odonnell
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Comment: Comment: Gold standard / Phylogenetics for intertidal fish
written by samuel.a.odonnell samuel.a.odonnell
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Comment: Comment: MEGAHIT assembly k-mer exceeds read length – is the result still reliable?
written by samuel.a.odonnell samuel.a.odonnell
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Comment: Comment: how to convert whole genome sequencing datasets to use for GWAS
written by samuel.a.odonnell samuel.a.odonnell
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Comment: Comment: Is this a duplication event (head-to-tail) in the bacterial genome?
written by samuel.a.odonnell samuel.a.odonnell
1 vote
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Comment: Comment: Handling high missingness when merging single-sample VCFs
written by samuel.a.odonnell samuel.a.odonnell
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Comment: Comment: Which one i should use for BLAST?
written by samuel.a.odonnell samuel.a.odonnell
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Comment: Comment: Which one i should use for BLAST?
written by samuel.a.odonnell samuel.a.odonnell
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Comment: Comment: Funannotate annotation help
written by samuel.a.odonnell samuel.a.odonnell
1 vote
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Comment: Comment: Does GATK output partial genotypes, where only one allele in a diploid individua
written by samuel.a.odonnell samuel.a.odonnell
1 vote
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Comment: Comment: Ultima wgs quality control
written by samuel.a.odonnell samuel.a.odonnell
2 votes
1 reply
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Comment: Comment: Genome assembly reference .fasta + Illumina reads
written by samuel.a.odonnell samuel.a.odonnell
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Comment: Comment: Estimate transposable elements copies and proportions
written by samuel.a.odonnell samuel.a.odonnell
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Comment: Comment: Estimate transposable elements copies and proportions
written by samuel.a.odonnell samuel.a.odonnell
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