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0 votes
0 replies
539 views
News: Course: Seafood Genomics
seafood foodtraceability nanopore genomics
written by Physalia-courses 281
0 votes
0 replies
677 views
How to pre-process raw microarray data?
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updated by GenoMax 16K • | written by egascon 6
0 votes
1 reply
667 views
Mass spectrometry data analysis
proteome-discoverer
written by Bioinformatics_16 0
0 votes
0 replies
412 views
ERROR with PRSKB
prskb vcf
updated by Ram 4.5K • | written by stefania.morelli92 0
0 votes
0 replies
597 views
Subunit Annotation in Genome Scale Models
database engineering uniprot metabolic enzyme
written by shafiat.dewan 0
0 votes
0 replies
549 views
CIBERSORTx PHP Fatal error
cibersortx php
written by JIWON KIM 0
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4 replies
1.2K views
Estimating haplotypes from sequencing reads
sequencing reads haplotypes
written by Arline 0
0 votes
7 replies
5.7K views
Ensembl IDs <-> Gene Symbols mapping -- Using org.Hs.eg.db, biomaRt or EnsDb.Hsapiens.v86?
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updated by tomas4482 43 • | written by DGTool 30
0 votes
1 reply
609 views
full lenght gene amplification from RNA seq data
rnaseq offtopic
updated by GenoMax 16K • | written by maryum 0
0 votes
4 replies
1.2K views
NCBI gene data
variants ncbi
written by chandrakala.m 0
0 votes
1 reply
660 views
Can I downsize ChIP-seq data for ChIP-ed samples
chip-seq downsize
updated by rfran010 174 • | written by Insect_gmx 0
4 votes
5 replies
12K views
What Is The Meaning Of Snp Strand
snp mapping strand
updated by bounlu 27 • | written by Jonathan Hsu 6
0 votes
0 replies
754 views
I need to binary plink files of human genome reference build37, however, Im completely lost and have no idea from where to begin
bplinkfiles human genome plink
updated by GenoMax 16K • | written by Marcos 0
0 votes
0 replies
725 views
MrBayes 3.2.7a in mpi mode staying at stationary state from the beginning
mpi mrbayes stationary beagle library
written by ricfoz 10
0 votes
14 replies
3.4K views
Deseq2 , Limma - the paired test seems to be incorrect - is it known problem ?
deseq
updated by i.sudbery 2.3K • | written by Alexander 22
0 votes
3 replies
1.7K views
Transcriptome analysis of virus infected plants and their controls
deg heatmap rna
updated by manaswwm 64 • | written by diya 0
0 votes
2 replies
2.3K views
Monocle3 Download error in R
rstudio monocle3
updated by GenoMax 16K • | written by odi 3
0 votes
3 replies
971 views
[bwa_idx_build] fail to open file 'bwtsw' : No such file or directory
bwa
updated by GenoMax 16K • | written by efan18808 0
0 votes
0 replies
557 views
wilcoxon signed rank test
anova r mixed-model fixed-effect random-effect
updated by Ram 4.5K • | written by Andy 0
0 votes
2 replies
2.7K views
How to download multiple fasta sequences and keep them organized by what genome they came from
blast sequences
written by ATS 1
0 votes
3 replies
796 views
After DimHeatmap no histogram values
r seurat dimheatmap
updated by Ram 4.5K • | written by Sander 0
0 votes
2 replies
1.1K views
Add tags/ header lines to a vcf file
bcftools vcf
updated by GenoMax 16K • | written by mahlet.teka 0
0 votes
0 replies
932 views
News: Introduction to GWAS (online course)
gwas imputation pipeline
updated by Ram 4.5K • | written by Physalia-courses 281
0 votes
2 replies
752 views
Making Changes to SequenceTubeMap
sequencetubemap vg
written by Mayank 1
1 vote
0 replies
1.2K views
Job: [UK] Bioinformatics Programmer (Visa sponsored)
nextflow galaxy genomes bacterial metagenomics
written by µbinfie 2
0 votes
0 replies
512 views
Help finding 10x genomics single cell dataset along with VCF
single-cell variant-calling
updated by Ram 4.5K • | written by debdeepto.m 0
0 votes
3 replies
1.3K views
WoLFPSort Installation
wolfpsort
updated by dthorbur 350 • | written by Patadu94 0
0 votes
6 replies
1.6K views
Removing batch effect and doing differential gene expression analysis
rna-seq
updated by ATpoint 9.1K • | written by sarahlee.bekaert 0
0 votes
2 replies
1.4K views
Signac: RegionStats: Not all seqlevels present in supplied genome, trying to load regions beyond the boundaries of non-circular sequence "chr8"
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updated by GenoMax 16K • | written by yau 0
0 votes
1 reply
694 views
Comparing quality across samples in a VCF
vcf
updated by Ram 4.5K • | written by ekirsch 0
0 votes
0 replies
649 views
miRNA prediction using mirMachine; what are the ways to study the functional significance of miRNAs?
annotation assembly mirmachine mirna
written by Vijith 10
0 votes
7 replies
1.6K views
FASTQ header correction to remove .1 and .2 from paired end - SRA files
fastq
updated by noodle 65 • | written by genomics_buddy 0
0 votes
9 replies
6.3K views
collapsePathways function throwing error
gsea fgsea r
updated by txema.heredia 31 • | written by Pac314 1
0 votes
0 replies
608 views
Creation of appropriate model matricies for Surrogate Variable Analysis (SVA)
normalization rna-seq sva microarray
written by qile0317 0
0 votes
2 replies
1.1K views
Exome sequencing dataset for SKAT
skat vep exome-sequencing
written by aurina.arnatk 1
1 vote
0 replies
822 views
How to summarize dbCAN3 results
dbcan cazy cazyme dbcan3 dbcan2
updated by Diego 0 • | written by Nishat 1
0 votes
13 replies
3.9K views
DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts in whole blood: is it normal to always get NS?
deg limma rstudio
updated by GenoMax 16K • | written by egascon 6
0 votes
3 replies
1.1K views
Mismatch between number of reads in fastq and mapped reads
samtools bam
updated by samuel.a.odonnell 86 • | written by shpak.max 8
0 votes
1 reply
933 views
Help Needed for Submitting Multiple Sequences to ENA
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updated by GenoMax 16K • | written by Lucas 0
0 votes
1 reply
618 views
gene annotation for mapman
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updated by GenoMax 16K • | written by hellokwmin 0
1 vote
3 replies
2.0K views
Changing barplot color on enrichment-based data
ggplot2
updated by GenoMax 16K • | written by Gerard 2
0 votes
2 replies
1.1K views
Bias in FDR distribution
deg distribution p-value limma
written by Daniel 1
6 votes
5 replies
3.9K views
Tool: SEDA (SEquence DAtaset builder): a desktop tool for processing FASTA files containing DNA and protein sequences
fasta sequences java
written by Hugo 40
0 votes
1 reply
962 views
vg view and vg surject both crashing after running giraffe
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updated by Ram 4.5K • | written by Jen 0
0 votes
2 replies
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Trimming adapters and primer on ONT nanopore sequencing
trimming 16s nanopore
written by l.gallucci 2
0 votes
0 replies
578 views
Looking to understand my Chi-squared results from a Pool-seq/ATAC-seq analysis
atac-seq pool-seq
written by Ronin 1
0 votes
4 replies
1.8K views
VG autoindexing error: Chromosome path not found in graph or haplotypes
vg vgteam
written by l.dammer 0
0 votes
2 replies
918 views
Sequece Raw Data QC A/T.G.C Distribution
illumina sequencing fastqc
updated by GenoMax 16K • | written by SomeOne 33
0 votes
8 replies
1.9K views
Are there instutions that allow to use their hpc without charge?
16s hpc nanopore
updated by a.alnawfal.1992 38 • | written by kerianaleerivera 1
0 votes
1 reply
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What is the best CNV caller for trio families WES data?
trio autosomal wes families cnv
updated by Samuel 0 • | written by fkm.022 0
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