This is a test version of Biostars. For the public version, visit https://www.biostars.org.
How to summarize dbCAN3 results

I have run dbCAN3 for my fungal whole proteome data (and also for some other stain for this species) using HMMER, dbCAN_sub and DIAMOND tool. For the results, I kept those predicted by >=2 of these tools as suggested by dbCAN3. I want to do comparison among different strains of my fungal species by reporting the number of different CAZyme families and interpreting the differences. How can I do that? I mean, how can I count the CAZyme families?

dbcan cazy cazyme dbcan3 dbcan2

0 answers

No answers yet.

Log in to answer this question.