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sumudu_rangika
sumudu_rangika
Reputation:
50
Joined:
9.9 years ago
Last seen:
4.8 years ago
Location:
Sri Lanka
Latest posts by user
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1 reply
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Comment: Comment: Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
written by sumudu_rangika • sumudu_rangika
2 votes
0 replies
2.0K views
Remove related samples using plink
plink ibd pihat plink2
written by sumudu_rangika • sumudu_rangika
0 votes
2 replies
4.0K views
Filter on Allele Balance using BCFTools
bcftools allele filter balance
updated by Shicheng Guo Shicheng Guo • written by sumudu_rangika • sumudu_rangika
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0 replies
1.4K views
CNVkit - confusion with batch command results
cnvkit
written by sumudu_rangika • sumudu_rangika
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0 replies
1.4K views
snpEff- HGVS annotation
snpeff hgvs
written by sumudu_rangika • sumudu_rangika
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0 replies
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Answer: A: Assistant Investigator Position In Computational & Evolutionary Genomics At Ioz,
written by sumudu_rangika • sumudu_rangika
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1 reply
1 view
Comment: Comment: Vcftools Runs Of Homozygosity Option
updated by Ram Ram • written by sumudu_rangika • sumudu_rangika
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0 replies
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Comment: C: Error in integrating a local database in to galaxy
written by sumudu_rangika • sumudu_rangika
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0 replies
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Comment: C: Error in integrating a local database in to galaxy
written by sumudu_rangika • sumudu_rangika
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4 replies
2.2K views
Error in integrating a local database in to galaxy
blastdb.loc megablst galaxy
updated by e.rempel e.rempel • written by sumudu_rangika • sumudu_rangika
0 votes
3 replies
1.9K views
GO analysis of a gene set
gene ontology analysis gene set leishmania
updated by Jean-Karim Heriche Jean-Karim Heriche • written by sumudu_rangika • sumudu_rangika
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0 replies
2.0K views
Problem including additional annotations to vcf using snpEff
annotations gff3 snpeff
updated by Ram Ram • written by sumudu_rangika • sumudu_rangika
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2 replies
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Answer: A: SNP annotation using gff3
written by sumudu_rangika • sumudu_rangika
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0 replies
2.0K views
population normalized read depth
read depth
updated by Biostar Biostar • written by sumudu_rangika • sumudu_rangika
1 vote
0 replies
3.3K views
Multi-sample variant calling
snps indels
written by sumudu_rangika • sumudu_rangika
0 votes
0 replies
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Comment: C: Combine single sample vcfs together
written by sumudu_rangika • sumudu_rangika
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2 replies
3.5K views
Combine single sample vcfs together
snp
updated by Ron Ron • written by sumudu_rangika • sumudu_rangika
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0 replies
1 view
Comment: C: How does Trimmomatic work?
written by sumudu_rangika • sumudu_rangika
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0 replies
1 view
Comment: C: BWA MEM mapping
written by sumudu_rangika • sumudu_rangika
0 votes
1 reply
1 view
Answer: A: BWA MEM mapping
written by sumudu_rangika • sumudu_rangika
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