0
votes
4
replies
262
views
4
votes
4
replies
3.0k
views
3
votes
4
replies
284
views
6
votes
4
replies
13k
views
0
votes
4
replies
406
views
2
votes
4
replies
228
views
0
votes
4
replies
2.3k
views
updated 3 days ago by
Ram
43k
•
written 13 months ago by
mohyeddine.taleb
•
0
1
vote
4
replies
347
views
6
votes
4
replies
291
views
2
votes
4
replies
298
views
3 days ago by
Esraa
•
0
0
votes
4
replies
273
views
1 day ago by
kilcdincer
▴
10
2
votes
4
replies
270
views
updated 2 days ago by
yura.grabovska
▴
90
•
written 2 days ago by
ev97
▴
20
3
votes
3
replies
229
views
2
votes
3
replies
286
views
0
votes
3
replies
165
views
0
votes
3
replies
203
views
0
votes
3
replies
212
views
2
votes
3
replies
276
views
3 days ago by
ramiro.barrantes
•
0
0
votes
3
replies
250
views
updated 1 day ago by
Pierre Lindenbaum
161k
•
written 2 days ago by
saifulislam99121
•
0
0
votes
3
replies
263
views
2
votes
3
replies
215
views
1
vote
3
replies
797
views
updated 1 day ago by
sansan_96
▴
90
•
written 2.7 years ago by
boymin2020
▴
80
1
vote
3
replies
279
views
updated 2 days ago by
jared.andrews07
★
16k
•
written 3 days ago by
jen
▴
10
1
vote
3
replies
272
views
1
vote
3
replies
250
views
2
votes
3
replies
237
views
3
votes
3
replies
204
views
1
vote
3
replies
205
views
updated 2 days ago by
Zhenyu Zhang
★
1.2k
•
written 2 days ago by
shpak.max
▴
50
3
votes
3
replies
269
views
0
votes
3
replies
192
views
3
votes
3
replies
365
views
updated 4 days ago by
Mathew
▴
140
•
written 7 days ago by
Christopher
•
0
0
votes
3
replies
354
views
1
vote
3
replies
436
views
0
votes
3
replies
347
views
updated 4 days ago by
Wei-Chen Pan
•
0
•
written 9 weeks ago by
Matvii Mykhailichenko
•
0
1
vote
2
replies
221
views
0
votes
2
replies
303
views
updated 5 days ago by
Zhenyu Zhang
★
1.2k
•
written 14 days ago by
yahn
•
0
1
vote
2
replies
181
views
0
votes
2
replies
210
views
updated 5 days ago by
colindaven
6.4k
•
written 5 days ago by
ramendra.sarma
•
0
0
votes
2
replies
181
views
1
vote
2
replies
269
views
4 days ago by
Lukas
•
0
1
vote
2
replies
228
views
2
votes
2
replies
185
views
updated 1 day ago by
Ram
43k
•
written 2 days ago by
jsmith120f
•
0
1
vote
2
replies
362
views
updated 4 days ago by
Ram
43k
•
written 5 days ago by
t.fortunato.asquini
•
0
1
vote
2
replies
209
views
updated 3 days ago by
colindaven
6.4k
•
written 3 days ago by
mbrav005
•
0
0
votes
2
replies
223
views
2
votes
2
replies
197
views
3
votes
2
replies
286
views
4 days ago by
analyst
▴
50
0
votes
2
replies
189
views
0
votes
2
replies
232
views
0
votes
2
replies
433
views
Recent Votes
Recent Locations •
All
Norway, just now
Spain, 5 minutes ago
India, 9 minutes ago
Vietnam, 11 minutes ago
Poland, 11 minutes ago
Canada, 17 minutes ago
China, 22 minutes ago
Recent Awards •
All
Popular Question to
finswimmer
16k
Popular Question to
Ezequiel
•
0
Popular Question to
alanh
▴
170
Popular Question to
ashkan
▴
160
Recent Replies
Answer: RNAseq coverage vs depth for transcript isoform expression?
by
Gordon Smyth
★
7.2k
See the exploration of isoform precision vs read length and sequencing depth in our paper: https://doi.org/10.1093/nar/gkad1167.
Our resul…
Comment: How to handle duplicated genes in TCGA data?
by
txema.heredia
▴
130
Why does the tool require gene symbols and not ensembl ids? Is it retrieving information from somewhere else? If so, your best bet is to fi…
Comment: how to treat the replicates while performing WGCNA
by
mavy
▴
10
Thank you so much for your response . Really appreciate it.
I will try the way you mentioned and will get back if I have any query
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
hophuquy0944
•
0
i have the same error, i used high performance computer, here is my code to set memory.
srun --nodes=1 --ntasks=1 --cpus-per-task=24 -…
Comment: Overlapping Ranges within Granges object
by
Alex Reynolds
35k
Yes, `bedmap` will perform operations on one or two BED files.
Comment: B allele frequency (BAF)
by
aidangcruickshank
▴
10
Apologies for resurrecting this post, but any idea what that functions "regions" paramater takes? Would it be a GRanges object? The documen…
Comment: How to handle duplicated genes in TCGA data?
by
Ngrin
•
0
Thanks @txema.heredia.The tool I am going to use only accepts gene symbols. This is the reason. So I cannot use ENS IDs.
Answer: Design for complex RNA-Seq experiment using Deseq2
by
swbarnes2
14k
This is a rather small experiment, I don't know that you can establish a meaningful baseline for each patient with a single pre sample, and…
Comment: GG Sankey plot
by
LauferVA
4.2k
@bk11 i changed this comment to an answer. if you disagree please let me know. thanks for sharing your knowledge. VAL
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
hannes.bongartz
•
0
Thanks for the input. Unfortunately, that didn't help either. I appreciate any other tips.
Thank you
Answer: GG Sankey plot
by
bk11
★
2.5k
You need to change your data table into a 'long' format. You can do something like this-
GOs_childs_recursive <- GOs_childs_recursive …
Answer: Trimming tool
by
ntsopoul
▴
60
I use Trim Galore which automatically recognizes adaptors.
https://github.com/FelixKrueger/TrimGalore
Here is the script I am using for…
Answer: Trimming tool
by
GenoMax
142k
There are plenty. `bbduk.sh` from BBMap suite (https://jgi.doe.gov/data-and-tools/software-tools/bbtools/bb-tools-user-guide/bbduk-guide/ )…
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
bk11
★
2.5k
Please check out [in this link.][1]
[1]: https://github.com/jokergoo/ComplexHeatmap/issues/349
Comment: Reconstruction of locus, order contigs
by
dthorbur
★
2.0k
[Here](https://www.biostars.org/p/9544689/) is a forum post that may answer your question.
Traffic: 1295 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6