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kalavattam
kalavattam
Reputation:
840
Joined:
7.4 years ago
Last seen:
2 days ago
Location:
United States
Google Scholar:
1iYWdbgAAAAJ

Introduction

I work as a bioinformatician and, for the most part, study chromatin and RNA biology.

Disciplines

  • Bioinformatics
  • Cell biology

Programming languages

  • R
  • Python
  • Shell
  • C++
  • Fortran

Education

  • PhD: U Cincinnati, cancer and cell biology
  • Postdoc: U Washington, computational biology
Latest posts by user
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Comment: Comment: Best approaches to identify pathways uniquely affected by different drugs?
written by kalavattam • kalavattam
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Answer: Answer: Permutation test for convergent gene expression changes
written by kalavattam • kalavattam
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Comment: Comment: sample size for pangenome project
written by kalavattam • kalavattam
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Comment: Comment: Differential Expression Contrast Interpretation
written by kalavattam • kalavattam
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Answer: Answer: Differential Expression Contrast Interpretation
written by kalavattam • kalavattam
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Comment: Comment: Giving Bulk-RNA Seq Analysis Tool (QC, Deseq2, GSEA, Cell Lines, etc) for free s
written by kalavattam • kalavattam
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Comment: Comment: RNA-seq with multiple treatment groups: Do I need additional correction across c
written by kalavattam • kalavattam
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Comment: Comment: RNA-seq with multiple treatment groups: Do I need additional correction across c
written by kalavattam • kalavattam
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Answer: Answer: what Trimmomatic parameters would you recommend for RNA-seq data ?
written by kalavattam • kalavattam
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Comment: Comment: RNA-seq with multiple treatment groups: Do I need additional correction across c
written by kalavattam • kalavattam
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Comment: Comment: Single-cell Proteomics
written by kalavattam • kalavattam
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Comment: Comment: MacOS Quicklook plugin for gtf and gff3 files?
written by kalavattam • kalavattam
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Forum: How do you disclose LLM/agent use in code and documentation?
ethics authorship agent attribution llm
updated by jared.andrews07 jared.andrews07 • written by kalavattam • kalavattam
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Comment: Comment: How should I start my computational bioinformatics journey?
written by kalavattam • kalavattam
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Answer: Answer: Correction & Advice Input for a design of a CUT&RUN pipeline
written by kalavattam • kalavattam
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Answer: Answer: MacOS Quicklook plugin for gtf and gff3 files?
written by kalavattam • kalavattam
1 vote
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Comment: Comment: bigwigAverage
written by kalavattam • kalavattam
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Answer: Answer: bigwigAverage
written by kalavattam • kalavattam
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Comment: Comment: Can I merge fastq files from different runs?
written by kalavattam • kalavattam
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Comment: Comment: super enhancer analysis
written by kalavattam • kalavattam
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