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mropri
mropri
Reputation:
170
Joined:
6.3 years ago
Last seen:
1.4 years ago
Location:
United States
Latest posts by user
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Comment: Comment: Normalizing Peaks in ChIP seq
written by mropri mropri
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3 replies
1.1K views
Normalizing Peaks in ChIP seq
chip-seq
updated by Ram Ram • written by mropri mropri
1 vote
0 replies
628 views
Calculating if cell proportions are significant using propeller
regression proportions scrna-seq
written by mropri mropri
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0 replies
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Comment: Comment: Calculating percentage of cells proliferating in single cell rna seq data
written by mropri mropri
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0 replies
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Comment: Comment: Before doing pseudobulk, should we get rid of genes that are only expressed in a
written by mropri mropri
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1 reply
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Comment: Comment: Before doing pseudobulk, should we get rid of genes that are only expressed in a
written by mropri mropri
0 votes
0 replies
0 views
Comment: Comment: Before doing pseudobulk, should we get rid of genes that are only expressed in a
written by mropri mropri
0 votes
1 reply
0 views
Comment: Comment: Before doing pseudobulk, should we get rid of genes that are only expressed in a
written by mropri mropri
0 votes
7 replies
2.7K views
Before doing pseudobulk, should we get rid of genes that are only expressed in a small number of cells?
deseq2 scrnaseq pseudobulk
written by mropri mropri
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0 replies
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Comment: Comment: How to account for total number of cells when aggregating for pseudobulk?
written by mropri mropri
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1 reply
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Comment: Comment: How to account for total number of cells when aggregating for pseudobulk?
written by mropri mropri
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5 replies
3.3K views
How to account for total number of cells when aggregating for pseudobulk?
pseudobulk
updated by ATpoint ATpoint • written by mropri mropri
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0 replies
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Comment: Comment: Why does DESeq2 give negative log2 fold change in treatment vs control for some
written by mropri mropri
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2 replies
2.4K views
Why does DESeq2 give negative log2 fold change in treatment vs control for some genes when normalized counts are higher in treatment? (Already checked my condition factors are correct)
deseq2
written by mropri mropri
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Comment: Comment: Error in checkFullRank(modelMatrix) : the model matrix is not full rank, so t
written by mropri mropri
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0 replies
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Comment: Comment: Error in checkFullRank(modelMatrix) : the model matrix is not full rank, so t
updated by GenoMax GenoMax • written by mropri mropri
0 votes
3 replies
1.5K views
Error in checkFullRank(modelMatrix) : the model matrix is not full rank, so the model cannot be fit as specified.
deseq2
written by mropri mropri
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0 replies
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Comment: Comment: Wilcox test using data slot (log normalized count values) of scRNA-seq between t
written by mropri mropri
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2 replies
1.4K views
Wilcox test using data slot (log normalized count values) of scRNA-seq between two groups
scrnaseq
written by mropri mropri
0 votes
1 reply
0 views
Comment: Comment: Calculating percentage of cells proliferating in single cell rna seq data
written by mropri mropri
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