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mropri
mropri
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170 (Trusted)
Joined:
6.4 years ago
Last seen:
1.5 years ago
Location:
United States
Latest posts by user
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Comment: Comment: Normalizing Peaks in ChIP seq
written by mropri 17
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3 replies
1.1K views
Normalizing Peaks in ChIP seq
chip-seq
updated by Ram 4.5K • | written by mropri 17
1 vote
0 replies
645 views
Calculating if cell proportions are significant using propeller
regression proportions scrna-seq
written by mropri 17
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0 replies
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Comment: Comment: Calculating percentage of cells proliferating in single cell rna seq data
written by mropri 17
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0 replies
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Comment: Comment: Before doing pseudobulk, should we get rid of genes that are only expressed in a
written by mropri 17
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1 reply
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Comment: Comment: Before doing pseudobulk, should we get rid of genes that are only expressed in a
written by mropri 17
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0 replies
0 views
Comment: Comment: Before doing pseudobulk, should we get rid of genes that are only expressed in a
written by mropri 17
0 votes
1 reply
0 views
Comment: Comment: Before doing pseudobulk, should we get rid of genes that are only expressed in a
written by mropri 17
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7 replies
2.7K views
Before doing pseudobulk, should we get rid of genes that are only expressed in a small number of cells?
deseq2 scrnaseq pseudobulk
written by mropri 17
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Comment: Comment: How to account for total number of cells when aggregating for pseudobulk?
written by mropri 17
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1 reply
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Comment: Comment: How to account for total number of cells when aggregating for pseudobulk?
written by mropri 17
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5 replies
3.4K views
How to account for total number of cells when aggregating for pseudobulk?
pseudobulk
updated by ATpoint 9.1K • | written by mropri 17
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0 replies
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Comment: Comment: Why does DESeq2 give negative log2 fold change in treatment vs control for some
written by mropri 17
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2 replies
2.4K views
Why does DESeq2 give negative log2 fold change in treatment vs control for some genes when normalized counts are higher in treatment? (Already checked my condition factors are correct)
deseq2
written by mropri 17
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Comment: Comment: Error in checkFullRank(modelMatrix) : the model matrix is not full rank, so t
written by mropri 17
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Comment: Comment: Error in checkFullRank(modelMatrix) : the model matrix is not full rank, so t
updated by GenoMax 16K • | written by mropri 17
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3 replies
1.5K views
Error in checkFullRank(modelMatrix) : the model matrix is not full rank, so the model cannot be fit as specified.
deseq2
written by mropri 17
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0 replies
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Comment: Comment: Wilcox test using data slot (log normalized count values) of scRNA-seq between t
written by mropri 17
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2 replies
1.4K views
Wilcox test using data slot (log normalized count values) of scRNA-seq between two groups
scrnaseq
written by mropri 17
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1 reply
0 views
Comment: Comment: Calculating percentage of cells proliferating in single cell rna seq data
written by mropri 17
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