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RNAseqer
RNAseqer
Reputation:
300
Joined:
7.5 years ago
Last seen:
1.5 years ago
Location:
United States

Very new to RNAseq, previous experience in genome assembly, phylogenetic analysis, substitution rate analysis etc etc.

Latest posts by user
0 votes
0 replies
526 views
Spatt2.1 a mirMap dependency, anyone know where I can get it?
mirmap dependency tarball
written by RNAseqer RNAseqer
0 votes
0 replies
0 views
Comment: Comment: identifying 3'utrs for multiple transcripts of genes from a summarized experimen
written by RNAseqer RNAseqer
0 votes
2 replies
1.2K views
identifying 3'utrs for multiple transcripts of genes from a summarized experiment.
biomart transcriptome utr
written by RNAseqer RNAseqer
1 vote
0 replies
0 views
Comment: Comment: samtools version 1.17 having difficulty parsing a filtering command. advice?
written by RNAseqer RNAseqer
0 votes
3 replies
1.6K views
samtools version 1.17 having difficulty parsing a filtering command. advice?
samtools cell rnaseq single
updated by aw7 • aw7 • written by RNAseqer RNAseqer
0 votes
3 replies
1.2K views
Biomart issue, why so few 3'utrs?
utr biomart
updated by GenoMax GenoMax • written by RNAseqer RNAseqer
0 votes
0 replies
0 views
Comment: Comment: mirbase gff and mature fastas for custom STAR index genome?
written by RNAseqer RNAseqer
0 votes
1 reply
889 views
sorted bam file generated from gff transcript fastas, how to get counts with HTseq?
htseq bam
updated by Ram Ram • written by RNAseqer RNAseqer
0 votes
1 reply
1.0K views
mirbase gff and mature fastas for custom STAR index genome?
mirbase indexing star genome
written by RNAseqer RNAseqer
0 votes
2 replies
0 views
Comment: Comment: Plotting a pvalue threshold for an FDR corrected pvalue <.05 when thats not pres
written by RNAseqer RNAseqer
0 votes
4 replies
2.4K views
Plotting a pvalue threshold for an FDR corrected pvalue <.05 when thats not present in R
fdr volcano plotting r plot
updated by Nitin Narwade Nitin Narwade • written by RNAseqer RNAseqer
0 votes
1 reply
1.6K views
coef /makeContrasts very different results
makecontrasts coef2 edger
updated by Gordon Smyth Gordon Smyth • written by RNAseqer RNAseqer
0 votes
0 replies
678 views
custom sizing question in ggseqlogo. sequence logo creation
logo sequence r ggseqlogo
written by RNAseqer RNAseqer
0 votes
0 replies
640 views
geo database for integrated miRNA-mRNA sequencing of neural cell
mir-seq mrna-seq
written by RNAseqer RNAseqer
0 votes
0 replies
662 views
How to get a screeplot of surrogate variables from sva()
screeplot sva svaseq
written by RNAseqer RNAseqer
0 votes
0 replies
0 views
Comment: Comment: Speech to text software/dictation program thats worthwhile for researchers?
written by RNAseqer RNAseqer
0 votes
0 replies
1.1K views
WGCNA, module preservation over permutations, how to?
module wgcna preservation
written by RNAseqer RNAseqer
0 votes
0 replies
0 views
Comment: Comment: convert from plink format into 012 format
written by RNAseqer RNAseqer
0 votes
0 replies
809 views
what regression model does step() in R use
lm function r model stepwise
written by RNAseqer RNAseqer
1 vote
1 reply
1.1K views
EdgeR exclude 0 count subjects for each gene
count edger r
updated by Gordon Smyth Gordon Smyth • written by RNAseqer RNAseqer
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