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ev97
ev97
Reputation:
40
Joined:
5.5 years ago
Last seen:
1.0 years ago
Location:
Malta
Latest posts by user
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Comment: Comment: How to handle RNA seq data with unbalanced % rRNA by group?
written by ev97 • ev97
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Comment: Comment: How to handle RNA seq data with unbalanced % rRNA by group?
written by ev97 • ev97
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1 reply
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Comment: Comment: How to handle RNA seq data with unbalanced % rRNA by group?
written by ev97 • ev97
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2 replies
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Comment: Comment: How to handle RNA seq data with unbalanced % rRNA by group?
written by ev97 • ev97
1 vote
10 replies
2.4K views
How to handle RNA seq data with unbalanced % rRNA by group?
fastqscreen rrna deseq2 rnaseq dge
updated by Carlo Yague Carlo Yague • written by ev97 • ev97
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Answer: Answer: Remove column from Seurat metadata
written by ev97 • ev97
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804 views
Should I focus on genes with MGI symbols when they have several Ensembl/Entrez IDs?
biomart entrez mgi ensembl ncbi
written by ev97 • ev97
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Comment: Comment: Should I normalize and scale my data again after doing subset(seu, idents=" ") i
written by ev97 • ev97
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2 replies
3.4K views
Should I normalize and scale my data again after doing subset(seu, idents=" ") in Seurat?
normalization seurat scrna-seq
written by ev97 • ev97
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Comment: Comment: Is it possible to modify the gene names from the x-axis in Seurat::Dotplot?
written by ev97 • ev97
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Comment: Comment: Is it possible to modify the gene names from the x-axis in Seurat::Dotplot?
written by ev97 • ev97
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3 replies
3.6K views
Is it possible to modify the gene names from the x-axis in Seurat::Dotplot?
seurat scrna-seq single-cell dotplot
updated by Ram Ram • written by ev97 • ev97
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Comment: Comment: Is there any minimum number of counts in scRNAseq to consider that a gene is exp
written by ev97 • ev97
1 vote
2 replies
1.5K views
Is there any minimum number of counts in scRNAseq to consider that a gene is expressed?
scrnaseq single-cell seurat scanpy umi
written by ev97 • ev97
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789 views
Is it possible to keep gene_id and gene_name columns using Seurat::Read10X?
seurat single-cell scrna-seq
updated by Ram Ram • written by ev97 • ev97
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Comment: Comment: Can 5' and 3' scRNAseq be processed with the same pipeline?
written by ev97 • ev97
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1 reply
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Comment: Comment: Can 5' and 3' scRNAseq be processed with the same pipeline?
written by ev97 • ev97
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4 replies
2.4K views
Can 5' and 3' scRNAseq be processed with the same pipeline?
singlecell seurat 10xgenomics scrnaseq
updated by yura.grabovska • yura.grabovska • written by ev97 • ev97
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2 replies
1.1K views
Removing adapters in all the RNAseq samples regardless if they have or not, is it correct?
fastqc trimming adapters cutadapt rnaseq
updated by dsull dsull • written by ev97 • ev97
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Comment: Comment: Does removal of contaminants in RNAseq data have an impact on downstream analyse
written by ev97 • ev97
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