This is a test version of Biostars. For the public version, visit https://www.biostars.org.
1 vote
0 replies
1.0K views
News: New Comprehensive Tutorial Series: Co-expression Networks, Hi-C, DNA Methylation & WGS/WES Analysis
genome hi-c exome rna-seq
updated by GenoMax 16K • | written by ngs101.com 39
0 votes
0 replies
489 views
News: Population Genomics course (online) - 16-20 March
gwas landscapegenomics introgression demographicmodels populationgenomics
written by Physalia-courses 281
0 votes
0 replies
513 views
News: Introduction to Microbial Ecology Workshop (UConn CBC, Dec. 15 - 18)
microbiome microbial training ecology workshop
written by bioadam 1
0 votes
2 replies
2.0K views
NovaSeq Xplus top unknown barcodes
fastq
updated by GenoMax 16K • | written by 1769mkc 127
0 votes
6 replies
3.8K views
STAR genome index generation: NF-core vs manual parameters (seeking clarification)
transcriptome r coding
written by Amb@r85 1
0 votes
0 replies
622 views
Job: Job Opening - Post-Doctoral Research Fellow, Computational - Ghajar Lab
opening doctoral job post
written by Fred Hutch (Recruiting) 3
2 votes
2 replies
3.2K views
Job: SciLifeLab PULSE: Program for Future Leaders in Life Science (48 positions!)
postdoctoral entrepreneur sweden mentoring leadership
written by Matthias Zepper 524
0 votes
1 reply
1.3K views
FDR Corrected P-Values in FindAllMarkers() in Seurat
seurat single-cell
updated by Bastien Hervé 680 • | written by s 0
0 votes
0 replies
636 views
News: Workshop: Introduction to Microbial Ecology, December 15–18
microbialecology bioinformatics workshop uconn microbiome
written by zsc25001 1
0 votes
0 replies
443 views
News: Upcoming Ensembl API and data access changes - new blog post available
ensembl
written by Ensembl Outreach 0
0 votes
0 replies
777 views
News: Spatial Transcriptomics course
spatialtranscriptomics singlecell bioconductor r
written by Physalia-courses 281
0 votes
4 replies
2.3K views
Re-assembling old RNA-seq reads vs. using an existing transcriptome assembly
non-model-organism de-novo-assembly rna-seq
written by Mostafa 0
0 votes
4 replies
2.5K views
"sortmerna" quitting early--is this is a memory issue?
sortmerna rna-seq
updated by colindaven 844 • | written by Andrew 0
0 votes
1 reply
1.0K views
Power calculations for differentially methylated DNA samples from sequencing
methylation
updated by colindaven 844 • | written by graeme.thorn 11
0 votes
5 replies
3.4K views
Data integration single cell using Harmony
singlecell 10x harmony dataintegration
updated by yura.grabovska 94 • | written by _deb 0
0 votes
2 replies
1.7K views
mapping sequences on specific region of bacteria genome
genome fastq mapping
written by cabraham03 3
0 votes
5 replies
7.7K views
Prokka output genes clusterization by function
data prokka shotgun
updated by Mensur Dlakic 3.0K • | written by shevch2009 2
0 votes
1 reply
1.2K views
Manual corrections for allele mismatches
mismatch harmonisation prs
updated by curious 90 • | written by Sakshi 0
0 votes
3 replies
1.7K views
Basics of WGCNA
wgcna
updated by pinheirofabiano 14 • | written by brooke.bell1299 0
0 votes
2 replies
1.2K views
Repeated Coordinate Errors (>171823) in NC_007605.1 (EBV) GTF Conversion (LMP2A/2B Exons)
cellranger
updated by GenoMax 16K • | written by halo22 30
0 votes
3 replies
2.0K views
combining RNA-seq replicates from low and deep-seq - is it useful?
biostats depth rna-seq
updated by GenoMax 16K • | written by michaelp 0
0 votes
8 replies
3.0K views
Issue while running Kenddata.
paired kenddata fastq
written by rana.elromh 0
0 votes
3 replies
1.2K views
dismatch between pyOMADB and the website ?
oma pyomadb
updated by Adrian Altenhoff 116 • | written by CH 0
0 votes
2 replies
1.5K views
Generating a Python parsable local db from dbSNP
python
written by gernophil 15
0 votes
1 reply
1.3K views
Confusion about which docking pose to visualize vs. which pose to use for binding energy
zinc docking autodockzn
written by Ria 0
0 votes
2 replies
770 views
How to identify WES source tissue (blood vs. other)
wes
written by gernophil 15
0 votes
4 replies
2.5K views
How to perform GO enrichment in non-model organisms?
go
updated by bioadam 1 • | written by CaERu _no_ korokoro 0
0 votes
0 replies
580 views
ARACNe-AP to viper aracne2regulon error
viper r aracne-ap aracne2regulon package
updated by GenoMax 16K • | written by thasweer 0
0 votes
0 replies
777 views
News: online course - Epigenomics Data Analysis
hic atacseq epigenomics chipseq multiomics
written by Physalia-courses 281
0 votes
2 replies
2.2K views
How excactly is the Q30 is calculated?
q30 mgi
updated by colindaven 844 • | written by rodrigo 0
0 votes
1 reply
991 views
ClinVar - how can a missense coding variant in a gene also be a variant on a non coding antisense RNA gene?
clinvar transcripts variants
updated by dthorbur 350 • | written by hello_bioinf 25
0 votes
1 reply
1.1K views
Question about QC and scrublet
scrublet
updated by Arup Ghosh 402 • | written by biotrekker 11
0 votes
2 replies
1.7K views
circos plot for genomic features
bed r plot track circos
written by Matteo Ungaro 16
0 votes
0 replies
687 views
News: Advanced Python for Biologists
python
updated by GenoMax 16K • | written by oliverhooker 14
0 votes
0 replies
574 views
News: Python for Biological Data Exploration & Visualisation
python
updated by GenoMax 16K • | written by oliverhooker 14
0 votes
0 replies
673 views
News: Single-Cell RNA-Seq Analysis
single rna-seq cell
updated by GenoMax 16K • | written by oliverhooker 14
0 votes
0 replies
596 views
News: Deep Learning Using Python
python learning deep
updated by GenoMax 16K • | written by oliverhooker 14
0 votes
0 replies
621 views
News: Python for Data Science & Statistical Computing
python
updated by GenoMax 16K • | written by oliverhooker 14
0 votes
2 replies
1.9K views
Chip-seq analysis Diffbind
chipseq diffbind
written by Irene 1
1 vote
3 replies
2.1K views
strong appearing variant not found by haplotypecaller in -ERC mode and deepvariant but with haplotypecaller in normal mode
deepvariant haplotypecaller
written by thomas.heigl.ibk 2
0 votes
0 replies
605 views
News: online course Introduction to Machine Learning with R (5th edition)
r ai omics genomics machinelearning
written by Physalia-courses 281
0 votes
5 replies
3.6K views
low quality data or file name swapping -- cellranger arc errors when processing 10x scMultiomics data
scmultiomics encode scrna-seq scatac-seq cellranger-arc
updated by Arup Ghosh 402 • | written by Wu-Sheng Zhang 1
1 vote
3 replies
3.8K views
The geo samples is not having sentrix id and sentrix position. But this information is needed for RnBeads workflow. How to proceed?
r next-gen sequencing
updated by yura.grabovska 94 • | written by preethibagopi28 1
0 votes
2 replies
1.5K views
Finding Sentrix ID in HM450K arrays
methylarray
updated by yura.grabovska 94 • | written by Betul 0
0 votes
1 reply
704 views
How to improving 2-Nucleotide RNA-seq Mapping Accuracy
base-conversion
written by 2411110159 0
0 votes
8 replies
3.4K views
ID unifiying across different datasets
uniprot genesymbole id
updated by GenoMax 16K • | written by zizigolu 438
0 votes
6 replies
5.1K views
Visualize methylation status in Pacbio Hifi read
pacbio methylation
updated by cmdcolin 448 • | written by Cathy 1
0 votes
2 replies
1.1K views
direct RNA long-reads alignment against reference genome
nanopore sequencing
written by frarodmar17 4
0 votes
0 replies
813 views
News: GWAS course - online, January 2026
r link imputation gwas
written by Physalia-courses 281
0 votes
3 replies
2.1K views
Bumphunter function in minfi
minfi methylation dmr bumphunter r
written by eebloom 11
Recent Votes
Recent Locations
Recent Replies