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0 votes
8 replies
1.1K views
How to use GenomicsDBImport
whole genome snps sequencing ngs
updated by GenoMax 16K • | written by ngseq 0
0 votes
4 replies
586 views
Unequally distributed volcano plot
deseq2 volcanoplot differentialgeneexpression
updated by GenoMax 16K • | written by Vinesh 1
0 votes
0 replies
195 views
Job: Position Available Bioinformatics Software Engineer - Immune Repertoire Profiling - Austin TX/Remote
bioinformatics immunology postgres agile aws
written by allovista 56
0 votes
1 reply
361 views
Comparing GSEA results across multiple cohorts
gsea heatmap
updated by ATpoint 9.1K • | written by Picasa 71
0 votes
2 replies
351 views
Classification of Bioinformatics in different countries
cs bioinformatics biology
written by anasjamshed 14
0 votes
2 replies
321 views
Bulk Turtle Fasta Downloads
ncbi genomes
updated by MirianT_NCBI 83 • | written by skibstedm 0
0 votes
1 reply
207 views
core dumped in vg pack using gaf file
vg
updated by Jouni Sirén 85 • | written by gulin 1
0 votes
0 replies
105 views
Tool: RAPTOR — open-source dashboard for RNA-seq data acquisition, pooling, and meta-analysis
rna-seq python sra meta-analysis geo
written by ayehgeek 3
3 votes
4 replies
1.3K views
Example of ClinVar pathogenic variant where the reference allele is pathogenic?
snp variant pathogenic clinvar
updated by tamerg 10 • | written by a615ebfb 8
0 votes
3 replies
454 views
Is gaf.gz supported by vg pack and gamsort?
vg
updated by Jouni Sirén 85 • | written by gulin 1
0 votes
2 replies
429 views
Best methods and tools for synteny analysis for large genome (16Gb genome size) to detect chromosome translocation, inversion ?
translocation synteny inversion
updated by dthorbur 350 • | written by Sony Nguyen 2
2 votes
5 replies
651 views
Forum: What repetitive bioinformatics / biomedical research task would you automate first?
openclaw tool ai
updated by Istvan Albert 10K • | written by 2364631600 2
0 votes
0 replies
113 views
Job: Assistant, Associate, or Full Project Scientist in Neurobiology
biology ucsd higher neurobiology education
written by UCSDBioSci 3
0 votes
0 replies
106 views
News: Cancer Genomics workshop
cancergenomics
written by Physalia-courses 281
0 votes
12 replies
1.4K views
UMI distribution
umi
updated by i.sudbery 2.3K • | written by QX 9
0 votes
4 replies
541 views
Proteomic
differential statistical expression programming biostatistic
written by Bio 0
2 votes
1 reply
291 views
TCGA methylation analysis starting from beta-values: recommended workflow?
methylation tcga r
updated by Zhenyu Zhang 130 • | written by ana 2
0 votes
2 replies
395 views
I‘m looking for the sequence of Pfu-sso7d
pfu-sso7d
updated by GenoMax 16K • | written by Z 0
0 votes
4 replies
477 views
Download CHARGE CRP GWAS summary data
charge gwas crp
written by jhy 1
0 votes
0 replies
95 views
scRNA compositional analysis
seq sccoda scrna
written by yadavsoumya647 2
0 votes
1 reply
285 views
Tool: Open-source tool for cancer variant interpretation from VCF files
acmg cancer vcf variants
updated by Ram 4.5K • | written by Punith 0
0 votes
0 replies
102 views
News: "Bioinformatic Networks" special issue
reconstruction comparison network algorithm visualization
written by jj 0
0 votes
4 replies
665 views
IntegrateData Seurat
sctransform seurat integration st
updated by tang 0 • | written by mmorillo 0
0 votes
3 replies
498 views
Low mapping in Metagenome assembly
microbiome assembly alignment metagenomics
updated by colindaven 844 • | written by avdhar 0
0 votes
6 replies
853 views
Forum: Should I use AI tool after 4 year back to Bioinfo?
bioinformatic ai tool
updated by lauraashaley 1 • | written by Frrch 1
0 votes
0 replies
76 views
Minimum PSM count for reliable modification stoichiometry in unenriched whole proteome open search data
proteomics ptm
updated by GenoMax 16K • | written by SWANITHA 0
0 votes
0 replies
66 views
News: (Online course) Conservation Genomics - 7–10 April
conservationgenomics ne populationgenomics
written by Physalia-courses 281
1 vote
0 replies
121 views
Tool: KaroSpace, an interactive exploration of spatial data
karospace spatial
written by Bastien Hervé 680
0 votes
0 replies
73 views
Need help with assessing the past trends of a genomic locus
population_genetics genome_assembly historical_demography comparative_genomics
written by pranavdatar01 1
0 votes
0 replies
148 views
Job: Hiring: Senior Scientist, Translational Genetics & RWE (Human Data–Driven Drug Discovery)
rwe
written by Shicheng Guo 963
1 vote
6 replies
626 views
Proteomics differential expression in longitudinal data
longitudinal expression proteomics differential
updated by Gordon Smyth 916 • | written by fnepo 4
3 votes
11 replies
1.1K views
Tool: Query different files in the big 3 clouds.
bigwig rust sam tabix
written by Andrew 3
0 votes
0 replies
108 views
Prepare protein form RoseTTAFold All-Atom fail (use charmm)
md rosettafold protein all-atom prepare
written by a0968026488 0
0 votes
0 replies
120 views
pydeseq2 DEA single factor but multiple levels
scrna-seq pydeseq2 deg dea deseq2
updated by GenoMax 16K • | written by npont 3
0 votes
0 replies
100 views
should I merge regions across samples in permutation testing with regioneR
permutations regioner statistics
written by eebloom 11
1 vote
0 replies
1.5K views
coefficient of variation or median absolute deviation
cv wgcna mad batch-effect
updated by Theo 0 • | written by NDA 2
0 votes
0 replies
199 views
Job: PhD Position (Fully Funded): Population Genetics & Microbiome Bioinformatics University of Arkansas – Department of Animal Sciences Advisor: Dr. Aranyak Goswami
bioinformatics human computational genetics biology
written by aranyak111 0
1 vote
0 replies
140 views
Tool: Free web tool: Evo 2 log-likelihood scoring for mutant sequences
arcinstitute genomics evo2 model
written by dami.gupta 2
0 votes
1 reply
327 views
Seurat integration join split
seurat single-cell sctransform integrated-analysis
written by michaelhojungyoon 1
0 votes
3 replies
404 views
How to analyze SRA metagenomic data without downloading large files locally (Galaxy or cloud alternatives)?
metagenomics
updated by GenoMax 16K • | written by usalamah718 0
0 votes
0 replies
104 views
Substitution matrix for Maximum likelihood tree and ASR
asr alignment
written by mobius238 0
0 votes
3 replies
376 views
Initialization of MySQL (MariaDb) for Funannotate.
annotations fungal funannotate
written by SomeOne 33
2 votes
7 replies
1.2K views
Help understanding best binning practices
binning viruses metagenome contigs
updated by 5heikki 1.1K • | written by boone5jones 2
1 vote
0 replies
92 views
News: News: Exploring biological mechanisms without a dataset using IPA
bioinformatics qiagenipa dataanalysis omics
written by Gabi 1
12 votes
17 replies
1.3K views
Tool: Daily Academic - Personalized scientific literature discovery
academic_discovery relevant_paper_discovery literature biorxiv_discovery web_app
written by Dimitris Grigoriadis 15
0 votes
0 replies
104 views
News: Online Course: Epigenomics Data Analysis (13–17 April )
rnaseq atacseq hic chipseq multiomics
written by Physalia-courses 281
0 votes
2 replies
325 views
Taxanomic classification of unpaired reads in paired-end read files with Kraken2 with --paired flag
metagenomics kraken2 taxanomic_classification ngs
written by Savindu 0
2 votes
4 replies
414 views
Is the Canonical Transcript Really the Dominant Isoform?
gtex
updated by Istvan Albert 10K • | written by Shicheng Guo 963
0 votes
0 replies
146 views
Job: PT lecturer in bioinformatics @ Tufts Biology
masters biostatistics teaching
written by Frank 0
1 vote
11 replies
6.9K views
RNA-SEQ where only a subset of genes is of interest
rna-seq deseq
updated by DriesB 12 • | written by Aspire 43
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