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npont
npont
Reputation:
30
Joined:
1.4 years ago
Last seen:
2 weeks ago
Location:
France

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Latest posts by user
0 votes
0 replies
49 views
Housekeeping Genes for normalization or doublet detection in scRNA-seq and Spatial Transcriptomics
scrna-seq xenium spatial-transcriptomics housekeeping-genes normalization
written by npont • npont
0 votes
1 reply
0 views
Comment: Comment: Distribution of Transcripts per Cell in Spatial Transcriptomics (Xenium)
written by npont • npont
0 votes
3 replies
251 views
Distribution of Transcripts per Cell in Spatial Transcriptomics (Xenium)
xenium spatial-transcriptomics spatialdata spatial-omics
updated by Bastien Hervé Bastien Hervé • written by npont • npont
0 votes
0 replies
109 views
pydeseq2 DEA single factor but multiple levels
scrna-seq pydeseq2 deg dea deseq2
updated by GenoMax GenoMax • written by npont • npont
0 votes
1 reply
170 views
sc.pl.heatmap absolute or relative expression?
scanpy scrna-seq expression heatmap
updated by ATpoint ATpoint • written by npont • npont
1 vote
1 reply
317 views
DEA best practices: raw vs. normalized data
scanpy scrna-seq deg
updated by ATpoint ATpoint • written by npont • npont
0 votes
1 reply
0 views
Comment: Comment: makeTxDbFromBiomart cannot open URL
written by npont • npont
0 votes
3 replies
748 views
makeTxDbFromBiomart cannot open URL
database txdb biomart ensembl
updated by GenoMax GenoMax • written by npont • npont
0 votes
0 replies
0 views
Comment: Comment: Gene coverage in Genome Analysis
written by npont • npont
0 votes
5 replies
1.1K views
Gene coverage in Genome Analysis
coverage ensembl genome
written by npont • npont
0 votes
1 reply
672 views
Appropriate normalization of skewed data for "Translating multiomics single-cell data" with MOSCOT
normalization biostatistics scrna-seq anndata moscot
updated by Kevin Blighe Kevin Blighe • written by npont • npont
0 votes
1 reply
0 views
Comment: Comment: Clustering with other data type than scRNA-seq using Seurat
written by npont • npont
0 votes
5 replies
1.7K views
Clustering with other data type than scRNA-seq using Seurat
countmatrix scrna-seq methylation seurat
updated by Mensur Dlakic Mensur Dlakic • written by npont • npont
0 votes
1 reply
0 views
Comment: Comment: Statistical test of difference between two conditions and account for the batch
written by npont • npont
0 votes
1 reply
7.0K views
DotPlot / VlnPlot Seurat
scrna-seq significance-testing test seurat
updated by Bastien Hervé Bastien Hervé • written by npont • npont
0 votes
1 reply
0 views
Comment: Comment: Statistical test of difference between two conditions and account for the batch
written by npont • npont
0 votes
6 replies
10K views
Statistical test of difference between two conditions and account for the batch
significance-testing test seurat scrna-seq batch
updated by Kevin Blighe Kevin Blighe • written by npont • npont
0 votes
1 reply
763 views
Interactive UMAP scanpy
umap scanpy interactive
updated by antonioggsousa antonioggsousa • written by npont • npont
0 votes
0 replies
0 views
Answer: Answer: custom BED to UCSC genome browser
written by npont • npont
0 votes
3 replies
1.3K views
custom BED to UCSC genome browser
browser ucsc ucsc-genome-browser genome methylation bed
written by npont • npont
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TODO: Awards