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1
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1
reply
224
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Exon often targeted by mobile element insertions?
epigenetics biology
updated 11 weeks ago by 3.9k • written 11 weeks ago by ★ 2.9k
5
votes
4
replies
600
views
Filter out ALT contigs from CRAM
CRAM
updated 5 months ago by 100k • written 5 months ago by ★ 2.9k
11
votes
6
replies
690
views
Medical genetics server for a developing country
server
updated 6 months ago by ★ 3.5k • written 6 months ago by ★ 2.9k
4
votes
4
replies
2.4k
views
Filtering long indels from VCF
VCF
updated 8 months ago by ▴ 460 • written 2.6 years ago by ★ 2.9k
4
votes
4
replies
613
views
Request for a linkage analysis tutorial
linkage
updated 8 months ago by 142k • written 8 months ago by ★ 2.9k
1
vote
2
replies
636
views
Manta and alignment name collision
SV
13 months ago by German.M.Demidov ★ 2.9k
0
votes
2
replies
677
views
GIAB and GRCh38 SV/CNV
benchmarking
14 months ago by German.M.Demidov ★ 2.9k
2
votes
3
replies
630
views
Resource for Enhancers for the gene X in different tissues
epigenetics
updated 17 months ago by ★ 2.9k • written 17 months ago by ★ 2.9k
0
votes
0
replies
452
views
Mouse variation VCF
VCF
19 months ago by German.M.Demidov ★ 2.9k
2
votes
2
replies
555
views
CNA calling in mouse tumor-normal WGS
CNV
19 months ago by German.M.Demidov ★ 2.9k
0
votes
0
replies
318
views
COVID GWAS: sample size (for PRS)
gwas
19 months ago by German.M.Demidov ★ 2.9k
4
votes
3
replies
731
views
An interpretation of an SV
SV
updated 22 months ago by ▴ 30 • written 22 months ago by ★ 2.9k
1
vote
0
replies
387
views
Relatedness with KING vs heterogeneous data
relatedness
2.0 years ago by German.M.Demidov ★ 2.9k
1
vote
2
replies
772
views
Inter-chromosome translocations in short read WGS
SV
updated 2.1 years ago by ★ 3.8k • written 2.1 years ago by ★ 2.9k
1
vote
2
replies
540
views
Fast genotyping for PRS calculation
PRS
2.2 years ago by German.M.Demidov ★ 2.9k
0
votes
0
replies
499
views
Array variant to reference-standard way
genotyping
2.6 years ago by German.M.Demidov ★ 2.9k
0
votes
0
replies
635
views
KING struggle: Relatedness
king relatedness
2.7 years ago by German.M.Demidov ★ 2.9k
2
votes
3
replies
747
views
Genotyping variants from BAM (human)
genotyping
updated 2.7 years ago by 142k • written 2.7 years ago by ★ 2.9k
2
votes
5
replies
1.4k
views
UMAP and "equal" objects
visualization
updated 2.9 years ago by • 0 • written 2.9 years ago by ★ 2.9k
1
vote
2
replies
1.3k
views
KING relatedness inference working way too long...
large-cohort
2.9 years ago by German.M.Demidov ★ 2.9k
1
vote
2
replies
908
views
Asking for papers: rare variants of potentially moderate impact
human disease genetics
3.1 years ago by German.M.Demidov ★ 2.9k
6
votes
10
replies
967
views
Power of differential expression for a single gene analysis
RNA-Seq
3.1 years ago by German.M.Demidov ★ 2.9k
0
votes
0
replies
450
views
Horizontal sub-windows for IGV
IGV bam
3.2 years ago by German.M.Demidov ★ 2.9k
0
votes
0
replies
541
views
Genotyping: array variants from WGS
array WGS
3.3 years ago by German.M.Demidov ★ 2.9k
0
votes
0
replies
749
views
Deviance in allele frequencies between arrays and WGS
GWAS PRS WGS array
3.3 years ago by German.M.Demidov ★ 2.9k
0
votes
4
replies
1.4k
views
CNAs calling in tumor-normal WGS data
CNA tumor-normal WGS
updated 3.5 years ago by 87k • written 3.5 years ago by ★ 2.9k
0
votes
1
reply
558
views
NGS-based diagnostics: regulatory regions catalogue
non-coding genome medicine
updated 3.6 years ago by 20 • written 3.8 years ago by ★ 2.9k
4
votes
5
replies
1.3k
views
Preparing files to call by Manta
manta sv bam fastq
3.8 years ago by German.M.Demidov ★ 2.9k
4
votes
3
replies
897
views
Strand Specificity of Mutations
snv
3.9 years ago by German.M.Demidov ★ 2.9k
0
votes
0
replies
709
views
FreeBayes and mosaic variants
snv somatic
4.0 years ago by German.M.Demidov ★ 2.9k
0
votes
0
replies
513
views
Linkage analysis from 3 VCFs?
linkage vcf WGS
4.0 years ago by German.M.Demidov ★ 2.9k
4
votes
6
replies
924
views
Find covered regions in a set of BAM files
coverage WES
4.1 years ago by German.M.Demidov ★ 2.9k
4
votes
8
replies
1.2k
views
bcftools merge fails: Only fixed-length vectors are supported
bcftools mutli-sample VCF
updated 4.1 years ago by ★ 3.2k • written 4.1 years ago by ★ 2.9k
5
votes
5
replies
1.0k
views
Whole intron deletion?
NGS WES SV
updated 4.1 years ago by 161k • written 4.1 years ago by ★ 2.9k
5
votes
1
reply
711
views
Clinics and Mobile Elements in WES data
MEI WES
updated 4.1 years ago by ▴ 30 • written 4.1 years ago by ★ 2.9k
1
vote
2
replies
815
views
Population Genetics: Identity by State measure
snp SNP
4.2 years ago by German.M.Demidov ★ 2.9k
0
votes
0
replies
655
views
Cancer association studies and CNAs
Cnv Tumor
4.2 years ago by German.M.Demidov ★ 2.9k
5
votes
5
replies
2.2k
views
SNP array CNV calling for Cancer tissue (.CEL files)
SNP microarray
updated 10 months ago by 43k • written 5.1 years ago by ★ 2.9k
5
votes
10
replies
1.0k
views
Clear deletion in arrays - no signal in NGS
cnv
4.4 years ago by German.M.Demidov ★ 2.9k
5
votes
8
replies
2.9k
views
ExomeDepth failure to run
cnv exomedepth
updated 4.4 years ago by ▴ 690 • written 4.4 years ago by ★ 2.9k
2
votes
4
replies
1.1k
views
Snp array intensity
Cnv Microarray
updated 12 weeks ago by 43k • written 4.4 years ago by ★ 2.9k
1
vote
0
replies
716
views
Reference Allele Bias
snv
4.5 years ago by German.M.Demidov ★ 2.9k
2
votes
6
replies
1.5k
views
Extract allele read counts for heterozygous positions in VCF
vcf
updated 4.6 years ago by ★ 3.6k • written 4.6 years ago by ★ 2.9k
0
votes
8
replies
1.7k
views
Number of Tandem and Interspersed duplications
CNV duplication SV
updated 4.6 years ago by ★ 2.9k • written 4.7 years ago by ★ 2.9k
10
votes
17
replies
3.8k
views
Ploidy Correction In NGS cancer data (human)
CNV ploidy cancer
4.9 years ago by German.M.Demidov ★ 2.9k
0
votes
0
replies
739
views
Pathway Annotation, grouping of sparse data on pathway level
pathway
5.2 years ago by German.M.Demidov ★ 2.9k
3
votes
14
replies
2.5k
views
Paired DMR methylation caller
bisulfite DMR
updated 5.4 years ago by 8.2k • written 5.5 years ago by ★ 2.9k
0
votes
0
replies
1.2k
views
Visualize B-allele frequency on IGV for 2 samples
igv
updated 13 months ago by 43k • written 5.5 years ago by ★ 2.9k
0
votes
3
replies
1.2k
views
Enrichment platforms for 1000GP exome data
data WES
5.6 years ago by German.M.Demidov ★ 2.9k
7
votes
19
replies
2.2k
views
Inconsistent Coverage on X chromosome between genders
coverage WES
6.4 years ago by German.M.Demidov ★ 2.9k
53 results • Page 1 of 2
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