GIAB and GRCh38 SV/CNV

Does anyone know the release status of gold standard datasets SV/CNV for GRCh38 in GIAB?

I see a "Preliminary results of T2T benchmark" - which is wonderful - but then, I'd expect GRCh38 data to be already available, is it? Can't find it...

benchmarking

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written 3.5 years ago by German.M.Demidov

1 answer

All vcf in hg19 and hg38 should be available on GIAB ftp : https://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/release/

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written 3.5 years ago by Nicolas Rosewick

Yeap, I think I made it unclear, I found SNVs/indels indeed, but not SVs and CNVs (the main interesting thing in my opinion)...Or is there also SVs/CNVs?

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written 3.5 years ago by German.M.Demidov

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