Limit : this year
all time today this week this month this year
385 results • Page 2 of 8
Sort: Votes
Rank Views Votes Replies
19
votes
5
replies
1.2k
views
6 follow
Forum: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 2023?
genomics snps survey papers
4 months ago by Raony Guimarães ★ 1.4k
19
votes
10
replies
1.6k
views
Forum: Pain points using commercial clouds
gpt tinybio
updated 8 months ago by ▴ 70 • written 8 months ago by ▴ 840
19
votes
6
replies
3.5k
views
Forum: ngs vs microarray
microarray ngs
updated 11 months ago by 43k • written 5.8 years ago by ▴ 20
19
votes
14
replies
2.2k
views
Forum: What is the amount of sequencing data produced annually?
data research sequencing
updated 7 months ago by 22k • written 8 months ago by ▴ 70
19
votes
7
replies
1.2k
views
9 follow
Forum: DNA in pixels
genome alignment sequencing
updated 11 months ago by 43k • written 3.5 years ago by ▴ 30
18
votes
2
replies
3.2k
views
Forum: Scripts on the Web: Bioinformatics Recipes
bioinformatics
updated 12 months ago by 43k • written 6.1 years ago by 100k
18
votes
7
replies
4.5k
views
Forum: Review of the CIGAR string format
alignment
updated 11 months ago by 43k • written 5.6 years ago by 8.6k
18
votes
12
replies
2.5k
views
6 follow
Forum: why GATK makes things more complicated ?
genomics
updated 11 months ago by 43k • written 5.3 years ago by ▴ 280
18
votes
16
replies
1.9k
views
Forum: Why are people not working on gene prioritization and candidate gene selection for new experiment design?
gene-prioritization
updated 11 months ago by 43k • written 5.6 years ago by ▴ 20
18
votes
11
replies
2.4k
views
8 follow
Forum: Create a File format to store Variant
hgvs json variant
updated 11 months ago by 43k • written 5.9 years ago by ★ 2.4k
17
votes
11
replies
1.0k
views
Forum: How to overcome the imposter syndrome in bioinformatics?
advice
3 months ago by sil_bioinfo ▴ 40
17
votes
14
replies
3.4k
views
Forum: Asking for feedback on a Python library for computing alignments
alignment Python
updated 11 months ago by ▴ 220 • written 2.3 years ago by ▴ 60
17
votes
17
replies
2.0k
views
6 follow
Forum: Journal for beginners
journal
updated 12 months ago by 43k • written 6.2 years ago by ▴ 20
17
votes
14
replies
1.9k
views
10 follow
Forum: What would be the trend in next few years in NGS era?
NGS sequencing
updated 11 months ago by 43k • written 5.5 years ago by ▴ 800
16
votes
7
replies
1.3k
views
Forum: What counts as "complex code"?
career
updated 11 months ago by 43k • written 5.7 years ago by ▴ 30
16
votes
8
replies
2.1k
views
8 follow
Forum: What are the most important unresolved problems in Bioinformatics?
bioinformatics
updated 10 months ago by 43k • written 7.6 years ago by ★ 2.5k
16
votes
10
replies
1.2k
views
6 follow
Forum: F*up Night style events for Bioinformatics ? Comment if you're interested!
mistakes
updated 6 weeks ago by 5.3k • written 7 weeks ago by ★ 2.4k
16
votes
6
replies
8.2k
views
7 follow
Forum: What computer skills should I put on my resume?
resume genome
updated 12 months ago by 43k • written 6.4 years ago by ▴ 30
15
votes
10
replies
2.4k
views
6 follow
Forum: help identifying bioinformatics operations tools
database next-gen operations genomics
updated 11 months ago by 43k • written 5.5 years ago by ▴ 80
15
votes
13
replies
4.2k
views
8 follow
Forum: Does a PhD or work experience set you up better to do bioinformatics work in industry?
advice industry phd
updated 4 months ago by 3.9k • written 18 months ago by ▴ 30
15
votes
9
replies
2.2k
views
6 follow
Forum: [Opinion] - What alignment software do you use?
next-gen alignment
updated 12 months ago by 43k • written 6.1 years ago by ▴ 30
15
votes
24
replies
2.6k
views
7 follow
Forum: Airport.bio: First class ticket to any biological database in the world
RNA-Seq ChIP-Seq SNP
updated 12 months ago by 43k • written 6.1 years ago by ▴ 350
15
votes
6
replies
4.3k
views
Forum: Which database software is better for bioinformatics web development? MySQL or MongoDB?
database mysql mongodb software
updated 11 months ago by 43k • written 5.7 years ago by ▴ 10
15
votes
11
replies
4.8k
views
9 follow
Forum: Methodological problems are extremely common for enrichment analysis - beware the pitfalls before you publish
GSEA DAVID enrichment-analysis -geneontology
updated 12 months ago by 43k • written 2.2 years ago by ★ 1.9k
14
votes
10
replies
2.2k
views
Forum: WGBS alignment with BitMapperBS
BitMapperBS bismark
updated 11 months ago by 43k • written 4.8 years ago by ★ 9.4k
14
votes
9
replies
5.0k
views
8 follow
Forum: MD into bioinformatics
MD career
updated 11 months ago by 43k • written 5.4 years ago by ▴ 30
14
votes
6
replies
2.5k
views
6 follow
Forum: Bioinformatics experience in programming
python R
updated 11 months ago by 43k • written 5.7 years ago by ▴ 20
14
votes
5
replies
7.0k
views
Forum: Seurat vs Monocle
R RNA-Seq next-gen single-cell
updated 11 months ago by 43k • written 4.9 years ago by 3.2k
14
votes
11
replies
6.8k
views
7 follow
Forum: Do you need a deduplication tool for FASTQ data in fastp?
deduplication fastp
updated 11 months ago by 43k • written 5.0 years ago by ★ 2.5k
13
votes
4
replies
1.3k
views
Forum: The shortcoming of shiny app in building webserver
R shiny webserver
updated 11 months ago by 43k • written 4.7 years ago by ▴ 120
13
votes
7
replies
1.3k
views
Forum: Feedback for my python package to combine results from multiple classifiers
annotation protein python machine-learning
updated 11 months ago by 43k • written 3.7 years ago by ▴ 110
13
votes
11
replies
4.8k
views
Forum: Anyone using Ubuntu on Windows (WSL)?
ubuntu wsl
updated 11 months ago by 43k • written 5.8 years ago by ▴ 250
13
votes
6
replies
1.3k
views
Forum: To Cloud or Not to Cloud - Privacy implications of genetic data sharing
security diagnostics DNA-Seq
updated 11 months ago by 43k • written 4.9 years ago by 11k
12
votes
4
replies
1.6k
views
Forum: Bioinformatics and biotechnology market in future.
genome next-gen
updated 11 months ago by 43k • written 4.7 years ago by • 0
12
votes
14
replies
2.5k
views
8 follow
Forum: Recovering bam files after unknown deletion in the storage
photorec bam sequencing
written 4.9 years ago by ▴ 70
12
votes
12
replies
1.4k
views
7 follow
Forum: Who qualify as a world class bioinformatician as seen in job ads
world-class bioinformatician qualification
updated 11 months ago by 43k • written 4.1 years ago by • 0
12
votes
5
replies
2.6k
views
Forum: We Need Your Input! Help Get Information For The Informatics Community And Get A Free Gift Card!
algorithm ngs
updated 11 months ago by 43k • written 11.0 years ago by ▴ 30
12
votes
0
replies
2.0k
views
Forum: Free Bioinformatics Courses(Curriculum)
ossu course Curriculum
updated 11 months ago by 43k • written 4.6 years ago by ★ 1.3k
12
votes
7
replies
7.2k
views
Forum: Differences between SMART-seq2, SMART-seq3, and 10x
cell smartseq UMIs single 10x
updated 7 weeks ago by ★ 6.0k • written 2.7 years ago by ▴ 70
12
votes
12
replies
3.0k
views
Forum: Programming interview via Skype
programming-test interview
updated 11 months ago by 43k • written 5.9 years ago by ▴ 50
12
votes
2
replies
3.0k
views
Forum: List of genome annotation tools (>140)
gene genome
updated 11 months ago by 43k • written 4.7 years ago by 8.6k
11
votes
13
replies
4.6k
views
6 follow
Forum: NGS Data storage solutions for small organisations or big labs
big-data HTS storage NGS metagenomics
updated 11 months ago by 43k • written 4.9 years ago by ▴ 830
11
votes
8
replies
1.4k
views
6 follow
Forum: How to write a review article in bioinformatics
article review
updated 8 months ago by 43k • written 9 months ago by ▴ 10
11
votes
5
replies
6.5k
views
Forum: Slurm, Son of Grid Engine, Mesos, and Hadoop YARN vs HTCondor and Torque
PBS HPC SDSC Torque
updated 11 months ago by 43k • written 5.8 years ago by ★ 9.4k
11
votes
8
replies
1.7k
views
Forum: Bioinformatics cores pricing model
pricing-models core Bioinformatics-services
updated 11 months ago by 43k • written 5.2 years ago by ▴ 160
11
votes
7
replies
6.6k
views
Forum: Using Graphics Processing Units (GPUs) in bioinformatics
algorithm GPU
updated 11 months ago by 43k • written 4.7 years ago by ▴ 310
11
votes
9
replies
2.3k
views
Forum: Survey: help define Gencode and NCBI primary transcripts
refseq ensembl gencode ncbi transcript
updated 12 months ago by 43k • written 6.1 years ago by 23k
11
votes
6
replies
1.6k
views
Forum: Posting a preprint paper on biostars.com
preprint
updated 11 months ago by 43k • written 5.6 years ago by ▴ 760
11
votes
5
replies
1.5k
views
Forum: What bioinformatic training?
training RNA-Seq illumina
updated 11 months ago by 43k • written 5.0 years ago by ▴ 150
11
votes
9
replies
2.5k
views
7 follow
Forum: Feature Selection and Dimensionality Reduction in 10X scRNA-seq data
software-error pca scRNA-seq
updated 12 months ago by 43k • written 4.4 years ago by 82k
385 results • Page 2 of 8
Recent Votes
Comment: switch off warning in blast command line
Forward And Reverse Strand Conventions
Answer: Would you bother re-mapping RNA-seq data from an old GRCh38 build to a newer ver
Comment: Converting Degree Minutes (DM) to Decimal Degrees (DD) using python script
Answer: Details on salmon index
ATAC-seq sample normalization
Answer: Faster Needleman-Wunsch rapid global alignment of two sequences?
Recent Locations • All
India, just now
India, just now
India, 5 minutes ago
India, 6 minutes ago
United States, 8 minutes ago
United States, 9 minutes ago
The University of Melbourne, 12 minutes ago
Recent Awards • All
Teacher to Rob 6.6k
Popular Question to Nyksubuz ▴ 10
Popular Question to Govardhan Anande ▴ 150
Popular Question to Lhl ▴ 760
Popular Question to Takuma ▴ 20
Popular Question to BATMAN • 0
Teacher to dario.garvan ▴ 520
Recent Replies
Comment: BiomartException: Query ERROR for existing dataset in BioMart by Nyksubuz ▴ 10
The dataset you want (taestivum_eg_gene) exists within the "plants_mart" schema, not the default schema. Your current code assumes the defa…
Answer: solution-Transcriptome.cpp:18:Transcriptome: exiting because of *INPUT FILE* err by Nikki Harris • 0
Hello It appears that the file path or file permissions may be the cause of the problem. Verify that the file "/geneInfo.tab" is present…
Comment: Add line under stat test by Nyksubuz ▴ 10
You could use [this][1] [1]: https://ggplot2.tidyverse.org/reference/geom_segment.html
Comment: API kegg - IndexError: list index out of range by Nyksubuz ▴ 10
It might be because the gene symbol is not found in the KEGG database. Add some extra error handling before parsing the results or do a man…
Comment: Sam file Header problem by saifulislam99121 • 0
Thank you for your reply. I am not very much sure about this RG. Can you explain me a bit?
Comment: GRIDSS: the Genomic Rearrangement IDentification Software Suite by dario.garvan ▴ 520
It seems that Alexandrov's [structural variant and copy number signatures][1] estimated by the [SigProfiler software ecosystem][2] aren't c…
Comment: Faster Needleman-Wunsch rapid global alignment of two sequences? by GenoMax 142k
Then you may want to see if a program like `lastz` ([**LINK**][1]) may be useful. [1]: https://github.com/lastz/lastz
Comment: Collect dispersed executable files and run them by using bingo. by Ram 43k
What is the purpose of this tool? I have `~/bin` in my $PATH and I soft-link all executables I need to that location so why install a new t…
Comment: Merge clusters in Seurat UMAP by bk11 ★ 2.4k
Can you try this? library(dplyr) seuratobj@meta.data <- seuratobj@meta.data %>% mutate(seurat_clusters = recode(seurat_clu…
Comment: Merge clusters in Seurat UMAP by kilcdincer ▴ 10
Thank you for the response but it does not change anything.
Comment: Merge clusters in Seurat UMAP by bk11 ★ 2.4k
I have not tested but you could try something like below- seuratobj$seurat_clusters[seuratobj$seurat_clusters==5]=0 seuratobj$seur…
Comment: Faster Needleman-Wunsch rapid global alignment of two sequences? by Gabriel R. ★ 2.9k
I know about it, isn't there a simple C++ static binary?
Comment: Faster Needleman-Wunsch rapid global alignment of two sequences? by Gabriel R. ★ 2.9k
needle is great! but it does not handle sequences of 100k or so.
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU by Ram 43k
Please use the formatting bar (especially the `code` option) to present your post better. You can use backticks for inline code (\`text\` b…
Comment: Single-cell ambient RNA correction: SoupX vs decontX contamination fraction by txema.heredia ▴ 130
The point is that you need to feed the ambient algorithm a clustering list as input. This way, it checks for genes present in the soup vs g…
Traffic: 1487 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6