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0 votes
29 replies
7.4K views
Gene labels problem in enhanced volcano
r ggplot2 enhancedvolcano
updated by Mensur Dlakic 3.0K • | written by anasjamshed 14
0 votes
19 replies
3.5K views
Matching transcriptomic data to clinical data
r
updated by Ram 4.5K • | written by Azra 1
0 votes
2 replies
1.2K views
Setting up our own server for Genomic Analysis
server hardware sequencing
updated by GenoMax 16K • | written by Maverick 1
0 votes
4 replies
970 views
Cell Cycle Labeled Fastq files
cell-cycle scrna-seq
updated by ATpoint 9.1K • | written by halimaakhter014 0
0 votes
0 replies
684 views
Need bedGraph File from VarScan2 Output
bedgraph deeptools varscan2 bigwig bed
updated by Ram 4.5K • | written by Jacob 0
0 votes
0 replies
777 views
HiC Explorer TAD calling - post processing
tad hic-explorer
updated by Ram 4.5K • | written by nach.mcnach 1
2 votes
3 replies
1.4K views
Inject haplotypes into rGFA?
pangenome
updated by Panos 191 • | written by agd27 13
0 votes
4 replies
1.2K views
Absolute logfc and Pvalue for statistical calculation
volcano-plot logfc
updated by Ram 4.5K • | written by anasjamshed 14
0 votes
3 replies
1.4K views
DESeq2 - Struggling to Define Desired Contrast
rna-seq deseq2
updated by Ram 4.5K • | written by robert.flynn.21 1
0 votes
2 replies
923 views
Is it possible to identify the strand of an RNA using UMI?
high-throughput umi srna qiagen rna-seq
updated by i.sudbery 2.3K • | written by Carolina 0
0 votes
3 replies
3.1K views
Find all locations of aligned reads with MQ (Mapping Quality) = 0.
align igv bam
updated by clealk 8 • | written by captainlabman 2
0 votes
5 replies
1.4K views
line 1: syntax error near unexpected token `Rsubread
featurecounts rna-seq linux
updated by Ram 4.5K • | written by sehriban.buyukkilic 1
0 votes
2 replies
893 views
Correlation Analysis of a particular gene and the DE expressed genes between two conditions
r correlation rna-seq
written by dzisis1986 7
4 votes
0 replies
1.0K views
Tool: GW: fast genome browser and variant exploration tool
visualization genome-browser genome variant-annotation genomics
written by clealk 8
0 votes
6 replies
2.3K views
How can I find the corresponding protein's name of one gene?
protein-encoding gene protein
updated by Wayne 208 • | written by Tianyu 0
0 votes
0 replies
580 views
results of topGO
topgo go-term go-id gene2go
updated by Ram 4.5K • | written by azadeh.taati 0
0 votes
1 reply
1.9K views
SPAdes error: finished abnormally, OS return value: 28
spades
updated by biofalconch 132 • | written by jiyoung 2
0 votes
4 replies
1.7K views
Molecular docking with Autodock
docking proteomics
updated by Ram 4.5K • | written by shwetamgr1 2
0 votes
1 reply
853 views
Conda appears different than yesterday
linux conda
updated by shenwei356 870 • | written by davy.cyl 0
6 votes
0 replies
1.8K views
Tutorial: 12 useful command line tools and tricks for genomics data science
unix
updated by zx8754 1.2K • | written by Ming Tommy Tang 469
0 votes
1 reply
1.2K views
Optimal network construction strategy to investigate interactions between proteins and metabolites in more than one disease
networks metabolomics proteomics cytoscape
updated by Scooter 31 • | written by Giovana 0
0 votes
8 replies
2.4K views
RNA seq for non-model species
non-model-species rna-seq
updated by dr_cfoster 125 • | written by weather 0
1 vote
9 replies
3.4K views
Accessing SRA file with multiple fastqs under one accession
sratoolkit fastq sra
updated by GenoMax 16K • | written by tony_88888 1
0 votes
2 replies
1.1K views
Deleting cells from seurat object
seurat
written by odi 3
0 votes
1 reply
820 views
Computing mid parent value for DE analysis
edger limma deseq2
updated by Gordon Smyth 916 • | written by pl23 0
0 votes
4 replies
1.7K views
allele matching between identical genotypes
haplotyping plink vcf gatk varaint
written by rj.rezwan 2
1 vote
0 replies
1.0K views
Herald: The Biostar Herald for Wednesday, January 31, 2024
herald
written by Biostar 380
0 votes
0 replies
504 views
Correlating all other genes with a hub gene - measuring the expression of a particular gene
r rna-seq
updated by Ram 4.5K • | written by dzisis1986 7
0 votes
4 replies
1.1K views
Help with ABySS use
abyss
written by sainavyav22 0
0 votes
10 replies
1.9K views
Cannot distinguish R1 or R2
fastq
updated by GenoMax 16K • | written by Long 1
0 votes
2 replies
1.5K views
Aligning a sequence with multiple sequences in LASTZ
lastz alignment
updated by Dave Carlson 223 • | written by Арсений 0
0 votes
1 reply
566 views
Need help on computational analysis of Erythrocytosis or polycythemia
polycythemia erythrocytosis myeloproliferative-neoplasms chuvash-disease
updated by andrebolerbarros 0 • | written by Awais 0
0 votes
2 replies
1.3K views
sweepfinder2
sweepfinder2
written by sevda 0
0 votes
1 reply
1.1K views
GEO database
series datasets
updated by jv 187 • | written by mrashad 9
0 votes
2 replies
957 views
Bulk Download Genpept Human Readable Files
download peptide
written by cs 0
0 votes
0 replies
560 views
genomation
r genomation
updated by Ram 4.5K • | written by daffodil 1
0 votes
5 replies
2.4K views
freebayes on nanopore reads
freebayes nanopore
written by Nodilan 1
0 votes
3 replies
2.4K views
1000G Reference Panel Hg38 Michigan Imputation Server
reference-panel hg38 1000g
written by yvyu 0
1 vote
3 replies
1.5K views
Differential expression analysis of lncRNA
expression lncrna counts
written by Bushra Bibi 8
0 votes
2 replies
1.1K views
Interpreting 3D refine results
3drefine
updated by Joe 2.2K • | written by Curious 1
0 votes
11 replies
6.2K views
Trimming nanopore reads
trim nanopore
updated by GenoMax 16K • | written by Nodilan 1
0 votes
4 replies
2.4K views
Packages don't update, but no error or warning is thrown
bioconductor
written by gernophil 15
1 vote
8 replies
2.7K views
PCA plot interpretation (single population)
pca gwas pruning
updated by AH 0 • | written by Shane 2
0 votes
3 replies
2.0K views
filter reads with >90% match
bam long-reads alignment
written by anuradharavi10 0
0 votes
3 replies
1.4K views
Mapping paired end
dna-seq mapping umi umitools ngs
written by Sarah 0
0 votes
3 replies
1.7K views
how to download BF ,CC and MF
proteomics
updated by geneontologyhelp 57 • | written by Bioinfo 2
0 votes
2 replies
1.0K views
move fasta and fastq files with the same name folder
for loop
written by cabraham03 3
1 vote
18 replies
6.6K views
How can I identify single-copy genes in a specific genome?
genome single-copy genes
updated by Dunois 301 • | written by Hamtaro 6
0 votes
5 replies
1.5K views
multiple alignment
genedoc alignment
updated by Mensur Dlakic 3.0K • | written by Fulvia 0
0 votes
0 replies
494 views
scRNA-seq atlas differential pathway activation
scrna-seq
written by jv 187
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