This is a test version of Biostars. For the public version, visit https://www.biostars.org.
sainavyav22
sainavyav22
Reputation:
0 (New)
Joined:
2.8 years ago
Last seen:
2.3 years ago
Location:
United States
Latest posts by user
0 votes
1 reply
870 views
Plotting the control-FREEC data
control-freec cnvs
updated by RD 3 • | written by sainavyav22 0
0 votes
1 reply
0 views
Comment: Comment: How to generate an oncoplot with most frequently mutated genes using maftools wi
written by sainavyav22 0
0 votes
1 reply
0 views
Comment: Comment: How to generate an oncoplot with most frequently mutated genes using maftools wi
written by sainavyav22 0
0 votes
1 reply
0 views
Comment: Comment: How to generate an oncoplot with most frequently mutated genes using maftools wi
updated by Ram 4.5K • | written by sainavyav22 0
0 votes
0 replies
0 views
Comment: Comment: Help with CNA analysis using control-FREEC
written by sainavyav22 0
0 votes
1 reply
0 views
Comment: Comment: Help with CNA analysis using control-FREEC
written by sainavyav22 0
0 votes
4 replies
1.2K views
Help with CNA analysis using control-FREEC
cna control-freec
written by sainavyav22 0
0 votes
7 replies
2.7K views
How to generate an oncoplot with most frequently mutated genes using maftools with annovar annotated output files
oncoplot maftools annovar
updated by Ram 4.5K • | written by sainavyav22 0
0 votes
0 replies
0 views
Comment: Comment: How to generate an Upset plot in R to plot the shared variants between cell free
written by sainavyav22 0
0 votes
2 replies
1.2K views
How to generate an Upset plot in R to plot the shared variants between cell free DNA samples
r upset
written by sainavyav22 0
0 votes
0 replies
593 views
Use of ichor CNA
dog cna genome
written by sainavyav22 0
0 votes
0 replies
0 views
Comment: Comment: Presence of unknown sites in ANNOVAR output file
updated by Ram 4.5K • | written by sainavyav22 0
0 votes
2 replies
878 views
Presence of unknown sites in ANNOVAR output file
annovar
updated by Ram 4.5K • | written by sainavyav22 0
0 votes
0 replies
0 views
Comment: Comment: Help with generating annotation database for dog genome to use in ANNOVAR for v
written by sainavyav22 0
0 votes
0 replies
0 views
Comment: Comment: Help with Base quality Score Recalibration (BQSR) using GATK
written by sainavyav22 0
0 votes
2 replies
998 views
Help with Base quality Score Recalibration (BQSR) using GATK
gatk bqsr
written by sainavyav22 0
0 votes
0 replies
569 views
How to extract the mutations specific to cancer after variant annotation
variant-annotation
updated by Ram 4.5K • | written by sainavyav22 0
0 votes
2 replies
1.2K views
Help with generating annotation database for dog genome to use in ANNOVAR for variant annotation of dog tumor sequences
annovar
written by sainavyav22 0
0 votes
1 reply
0 views
Comment: Comment: Reference Guided genome assembly
written by sainavyav22 0
0 votes
1 reply
0 views
Comment: Comment: Reference Guided genome assembly
written by sainavyav22 0
Latest awards to user
TODO: Awards