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sainavyav22
sainavyav22
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2.5 years ago
Last seen:
2.0 years ago
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Latest posts by user
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1 reply
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Plotting the control-FREEC data
control-freec cnvs
updated by RD • RD • written by sainavyav22 • sainavyav22
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1 reply
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Comment: Comment: How to generate an oncoplot with most frequently mutated genes using maftools wi
written by sainavyav22 • sainavyav22
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1 reply
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Comment: Comment: How to generate an oncoplot with most frequently mutated genes using maftools wi
written by sainavyav22 • sainavyav22
0 votes
1 reply
0 views
Comment: Comment: How to generate an oncoplot with most frequently mutated genes using maftools wi
updated by Ram Ram • written by sainavyav22 • sainavyav22
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0 replies
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Comment: Comment: Help with CNA analysis using control-FREEC
written by sainavyav22 • sainavyav22
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1 reply
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Comment: Comment: Help with CNA analysis using control-FREEC
written by sainavyav22 • sainavyav22
0 votes
4 replies
1.1K views
Help with CNA analysis using control-FREEC
cna control-freec
written by sainavyav22 • sainavyav22
0 votes
7 replies
2.6K views
How to generate an oncoplot with most frequently mutated genes using maftools with annovar annotated output files
oncoplot maftools annovar
updated by Ram Ram • written by sainavyav22 • sainavyav22
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0 replies
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Comment: Comment: How to generate an Upset plot in R to plot the shared variants between cell free
written by sainavyav22 • sainavyav22
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2 replies
1.2K views
How to generate an Upset plot in R to plot the shared variants between cell free DNA samples
r upset
written by sainavyav22 • sainavyav22
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0 replies
562 views
Use of ichor CNA
dog cna genome
written by sainavyav22 • sainavyav22
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0 replies
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Comment: Comment: Presence of unknown sites in ANNOVAR output file
updated by Ram Ram • written by sainavyav22 • sainavyav22
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2 replies
851 views
Presence of unknown sites in ANNOVAR output file
annovar
updated by Ram Ram • written by sainavyav22 • sainavyav22
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0 replies
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Comment: Comment: Help with generating annotation database for dog genome to use in ANNOVAR for v
written by sainavyav22 • sainavyav22
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0 replies
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Comment: Comment: Help with Base quality Score Recalibration (BQSR) using GATK
written by sainavyav22 • sainavyav22
0 votes
2 replies
961 views
Help with Base quality Score Recalibration (BQSR) using GATK
gatk bqsr
written by sainavyav22 • sainavyav22
0 votes
0 replies
534 views
How to extract the mutations specific to cancer after variant annotation
variant-annotation
updated by Ram Ram • written by sainavyav22 • sainavyav22
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2 replies
1.1K views
Help with generating annotation database for dog genome to use in ANNOVAR for variant annotation of dog tumor sequences
annovar
written by sainavyav22 • sainavyav22
0 votes
1 reply
0 views
Comment: Comment: Reference Guided genome assembly
written by sainavyav22 • sainavyav22
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1 reply
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Comment: Comment: Reference Guided genome assembly
written by sainavyav22 • sainavyav22
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