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0 replies
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Job: Bioinformatics/Data Science postdoc position in Aarhus, Denmark
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updated by Ram 4.5K • | written by besen 0
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Job: Bioinformatics Assistant Researcher - Metabarcoding - Honolulu, Hawaii
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What to do with multiple genes in ballgown?
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RNA_seq
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updated by Arton 2 • | written by Wagner Daniel 0
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Job: Bioanalysis Neuroimaging position
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GENERAL R QUESTION: Accessing package versions of an old R object/project?
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Difference between reading concatenated PE reads into jellyfish and merging paired end .jf outputs independently
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0 votes
0 replies
603 views
ImmuCellAI
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updated by Ram 4.5K • | written by sana 0
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Is there a program that can predict the sequence of an organisms telomeres just from raw sequencing reads
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written by Mark 6
0 votes
4 replies
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Seqkit Replace
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updated by Ram 4.5K • | written by pablo 35
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1 reply
832 views
Calculating (Groupwise) Log2fold change using values obtained from SST-RMA?
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0 replies
494 views
Issue to run gatk4 spark
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written by Mojtaba 0
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5 replies
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samtools mpileup taking too long
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updated by Ram 4.5K • | written by K 0
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Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
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updated by lcj34 42 • | written by b.contreras.moreira 49
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SNP and Genes position matching dataframes in R
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1 reply
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Alignment tool of repeat expansion detection
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updated by Jesse 94 • | written by adarsh 8
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How to speed-up to contruct phylogenetic tree
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Bed file filtering
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updated by marco.barr 22 • | written by kamila.temirkhanova 0
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18 replies
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Import list and assign distinct colors in R
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written by kmyers2 9
1 vote
7 replies
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Does removal of contaminants in RNAseq data have an impact on downstream analyses?
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updated by Chris Dean 42 • | written by ev97 4
0 votes
0 replies
708 views
HADDOCK 2.4
protein docking
written by Preeti 0
0 votes
7 replies
2.1K views
java version compatible with GATK 3.2.2
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written by shpak.max 8
2 votes
4 replies
1.8K views
Receptors with internalization capability
receptor
written by Shicheng Guo 963
1 vote
2 replies
1.5K views
Difference between mapping quality and minimum base quality
freebayes
written by A_heath 18
0 votes
10 replies
3.4K views
Can't properly use GATK Mutect2 to call somatic variants from my tumor/normal samples pair (BAM to VCF)
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updated by GenoMax 16K • | written by Samuel 2
0 votes
5 replies
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UMI_extract for paired end reads of micro_RNA
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updated by ATpoint 9.1K • | written by otieno43 4
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5 replies
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how to convert SummarizedExperiment files to DESeqDataSet??
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updated by Haci 74 • | written by kayah 2
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6 replies
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Convert Gene symbol to Ensembl ID
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46 replies
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Tool: ChatGPT optimized for bioinformatics questions
gpt
updated by LauferVA 497 • | written by Sasha 85
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quality control scRNAseq
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updated by jv 187 • | written by sarahmanderni 13
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conda install -Killed
conda
written by marco.barr 22
0 votes
1 reply
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Detecting presence of UMI from BAM/fastq files without prior knowledge
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updated by i.sudbery 2.3K • | written by artemd 2
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BLAST parameters for sequences with high similarity
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updated by GenoMax 16K • | written by behzad.karkaria 0
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3 replies
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Reformatting Merged and Unmerged Paired-End Files
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updated by GenoMax 16K • | written by young_bioinformatician 25
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ColabFold
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updated by dthorbur 350 • | written by Preeti 0
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News: Learn how to create robust bioinformatics pipelines for reproducible and comparable NGS analyses
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SAMstat mapping quality report MAPQ gt vs MAPQ lt
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I can't add VAF from population for all of my variants from VCF file
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2 replies
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VCF file transfer to a better genome
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updated by colindaven 844 • | written by Nilo 2
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Pan genome of genes
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updated by b.contreras.moreira 49 • | written by Pedro 0
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Get_Homologues
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updated by b.contreras.moreira 49 • | written by utkarsh.sood 4
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Tutorial for analyzing WGBS data
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Some questions about bulk RNA-seq data normalization
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repeatseq compilation issues
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ComplexHeatmap anno_mark position changes with height of gene expression heatmap
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0 votes
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compare the assembler MaSuRCA and SPAdes for assembly unmapped reads
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how to run multiple bam files for CNVkit input
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Stringtie error: Error: input file –e cannot be found!
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written by menyawino 0
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