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Showing :
questions
8
votes
11
replies
3.7k
views
Error in fetching the Refseq using Taxonomic ID
eutility
NCBI
Reference sequence
updated 2.6 years ago by
Nelo
▴ 20 • written 6.8 years ago by
Paul
▴ 80
11
votes
7
replies
13k
views
7 follow
Is there a way to download FASTq files from SRR IDs?
eutility
fastq
sra
updated 2.9 years ago by
Sukjun Kim
▴ 90 • written 6.8 years ago by
Paul
▴ 80
2
votes
3
replies
2.1k
views
how to draw a decision tree?
data-mining
updated 14 months ago by
Ram
43k • written 9.9 years ago by
Paul
▴ 80
6
votes
8
replies
6.2k
views
6 follow
How to perform bidirectional BLAST?
Bidirectional
Blast
updated 5.2 years ago by
Biostar
20 • written 6.9 years ago by
Paul
▴ 80
5
votes
4
replies
3.1k
views
How to do synteny analysis between two bacterial genome?
synteny
genome
de-novo
updated 5.2 years ago by
Joe
21k • written 5.2 years ago by
Paul
▴ 80
2
votes
4
replies
3.5k
views
Genome annotation using COG
sequencing
annotation
COG
5.3 years ago by
Paul
▴ 80
4
votes
2
replies
1.2k
views
Genome Annotation of a new bacterial strain
Assembly
genome
sequencing
annotation
updated 5.4 years ago by
Biostar
20 • written 5.5 years ago by
Paul
▴ 80
6
votes
3
replies
919
views
Genes which are not associated with Alzheimer's
genes
Alzheimers
omim
updated 5.5 years ago by
Michael
54k • written 5.5 years ago by
Paul
▴ 80
0
votes
0
replies
2.0k
views
How do i set different threshold to get multiple values for ROC plot
ROC
R
SVM
e1071
threshold
5.6 years ago by
Paul
▴ 80
0
votes
0
replies
2.0k
views
Microarray analysis using limma multiple groups
limma
microarray
affymetrix
updated 5.7 years ago by
Ram
43k • written 5.7 years ago by
Paul
▴ 80
6
votes
7
replies
1.9k
views
lesser fold change value using RMA background correction
microarray
DEG
Limma
RMA
Normalization
5.7 years ago by
Paul
▴ 80
0
votes
0
replies
2.5k
views
How to get complete SNPs list using Mauve
Assembly
genome
SNP
java
mauve
5.7 years ago by
Paul
▴ 80
3
votes
2
replies
2.4k
views
How to export the SNPs between whole genome alignments using the command line?
mauve
alignment
sequence-alignment
variant
SNP
updated 5.7 years ago by
h.mon
35k • written 5.7 years ago by
Paul
▴ 80
6
votes
12
replies
2.2k
views
Aligning Contigs of various Mtb strains to a reference genome and get the variants
Assembly
Mapping
Variants
GWAS
updated 5.7 years ago by
k.kathirvel93
▴ 300 • written 5.7 years ago by
Paul
▴ 80
3
votes
12
replies
3.1k
views
Aligning Ion torrent sequenced genome with a reference sequence
NGS
SNP
Bowtie
sequencing
6.1 years ago by
Paul
▴ 80
1
vote
1
reply
1.2k
views
SRA tootkit to download pileup formats using SRR accessions
next-gen
sequencing
sratoolkit
pileup
6.1 years ago by
Paul
▴ 80
0
votes
3
replies
1.8k
views
Mapping multiple reads to a single genome
bash
updated 6.8 years ago by
PoGibas
5.1k • written 6.8 years ago by
Paul
▴ 80
9
votes
8
replies
4.4k
views
Mapping HGNC ID to uniprot ID
uniprot
RNA-Seq
gene
updated 18 months ago by
Ram
43k • written 8.8 years ago by
Paul
▴ 80
2
votes
3
replies
2.1k
views
Retrieving SRA files using Taxonomic IDs
Eutility
sra
taxonomy
6.8 years ago by
Paul
▴ 80
0
votes
0
replies
1.3k
views
Clinical Trials data to Standard disease categories
Clinical-Trials
updated 13 months ago by
Ram
43k • written 7.9 years ago by
Paul
▴ 80
0
votes
1
reply
2.1k
views
How to draw a tree from BLAST toolkit output
blast
toolkit
tree
6.9 years ago by
Paul
▴ 80
5
votes
11
replies
4.0k
views
how to download all the complete genomes for mycobacteria from NCBI?
genome
NCBI
sequence
updated 2.9 years ago by
Debut
▴ 20 • written 7.0 years ago by
Paul
▴ 80
8
votes
8
replies
5.4k
views
SPAdes: <jemalloc>: Error in malloc(): out of memory
Assembly
de novo
bacterial
genome
SPAdes
updated 7.0 years ago by
h.mon
35k • written 7.0 years ago by
Paul
▴ 80
4
votes
7
replies
13k
views
How to assemble contigs?
denovo
Assembly
sequencing
contigs
updated 7.0 years ago by
vmicrobio
▴ 290 • written 7.0 years ago by
Paul
▴ 80
3
votes
3
replies
1.8k
views
How do I analyze and annotate the results of a Bacterial De novo assembly ?
Assembly
De-novo
bacteria
CLC genomics
updated 7.0 years ago by
nora
▴ 40 • written 7.0 years ago by
Paul
▴ 80
14
votes
16
replies
5.4k
views
7 follow
Bacterial de novo genome assembly
next-gen
sequencing
de-novo
genome
Assembly
updated 7.1 years ago by
Brian Bushnell
20k • written 7.1 years ago by
Paul
▴ 80
1
vote
3
replies
1.3k
views
Mapping two genome annotation files
next-gen
sequencing
updated 7.1 years ago by
Pierre Lindenbaum
161k • written 7.1 years ago by
Paul
▴ 80
8
votes
9
replies
3.7k
views
Mapping a chromosome position with Gene ID
SNP
next-gen
sequencing
R
excel
7.1 years ago by
Paul
▴ 80
2
votes
1
reply
4.0k
views
how to convert Locus tag to old locus tag?
Locus-tag
R
web-scraping
HTML
Locus-tags
7.1 years ago by
Paul
▴ 80
0
votes
1
reply
1.4k
views
Retrieving data from Kegg
Kegg
pathway database
genes
genome
updated 7.1 years ago by
EagleEye
7.5k • written 7.1 years ago by
Paul
▴ 80
3
votes
4
replies
2.0k
views
How To Find Out The Transcripts?
transcript
transcriptome
updated 12.7 years ago by
Larry_Parnell
16k • written 12.7 years ago by
Paul
▴ 80
31 results • Page
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