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k.kathirvel93
k.kathirvel93
Reputation:
310
Joined:
10.5 years ago
Last seen:
3 months ago
Location:
India
Latest posts by user
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0 replies
804 views
Extracting list of mutations from .tsv file and arrange them in protein specific with binary 0 (Absent) and 1 (Present) values
bash scripting awk python
written by k.kathirvel93 k.kathirvel93
0 votes
3 replies
1.3K views
Merge two .fastq files from two different lane
loop ngs merge fastq cat
updated by GenoMax GenoMax • written by k.kathirvel93 k.kathirvel93
0 votes
1 reply
1.2K views
How to obtain consensus fasta sequence from fasta file converted from BAM file?
assembly fasta bamtofasta
updated by cpad0112 cpad0112 • written by k.kathirvel93 k.kathirvel93
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0 replies
0 views
Comment: Comment: Bowtie BAM to Fasta extraction: Only mapped reads in single contig
written by k.kathirvel93 k.kathirvel93
0 votes
2 replies
1.3K views
Bowtie BAM to Fasta extraction: Only mapped reads in single contig
genome bam fasta assembly covid
written by k.kathirvel93 k.kathirvel93
0 votes
4 replies
1.9K views
Where I can get pipeline for covid genome assembly?
pipeline assembly covid genome
updated by Friederike Friederike • written by k.kathirvel93 k.kathirvel93
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0 replies
0 views
Comment: Comment: How can i get gene name instead of gene ID from prepDE.py after STRINGtie?
written by k.kathirvel93 k.kathirvel93
0 votes
2 replies
0 views
Comment: C: How to remove sequence reads contains more than 1 X from multifasta file?
written by k.kathirvel93 k.kathirvel93
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0 replies
0 views
Comment: C: How to remove sequence reads contains more than 1 X from multifasta file?
written by k.kathirvel93 k.kathirvel93
0 votes
10 replies
4.2K views
How to remove sequence reads contains more than 1 X from multifasta file?
sequence sequencing
updated by manojkumarbioinfo manojkumarbioinfo • written by k.kathirvel93 k.kathirvel93
0 votes
4 replies
3.8K views
Phylogenetic tree construction from MAFFT aligned large genome dataset ?
alignment sequence genome
updated by Anand Rao Anand Rao • written by k.kathirvel93 k.kathirvel93
0 votes
1 reply
0 views
Comment: C: how to remove specific sequences from multi-fasta file which contains N ?
written by k.kathirvel93 k.kathirvel93
0 votes
3 replies
2.1K views
how to remove specific sequences from multi-fasta file which contains N ?
genome sequencing sequence alignment
written by k.kathirvel93 k.kathirvel93
0 votes
1 reply
735 views
extract only reads repeated more than 10 times from BLASTp excel sheet output
assembly alignment sequence
written by k.kathirvel93 k.kathirvel93
0 votes
1 reply
0 views
Comment: C: How to perform BLASTp with two multifasta protein sequence files?
written by k.kathirvel93 k.kathirvel93
0 votes
3 replies
122 views
How to perform BLASTp with two multifasta protein sequence files?
next-gen sequencing sequence
written by k.kathirvel93 k.kathirvel93
0 votes
1 reply
0 views
Comment: C: How to extract sequences from multi fasta file, which contains specific primers?
written by k.kathirvel93 k.kathirvel93
0 votes
1 reply
0 views
Comment: C: How to extract sequences from multi fasta file, which contains specific primers?
written by k.kathirvel93 k.kathirvel93
0 votes
2 replies
2.1K views
Sort header from the multifasta sequnce file into only gene name
genome alignment sequencing sequence gene
updated by gayachit gayachit • written by k.kathirvel93 k.kathirvel93
0 votes
1 reply
0 views
Comment: C: How to extract sequences from multi fasta file, which contains specific primers?
written by k.kathirvel93 k.kathirvel93
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