46 minutes ago by
Eltercertopico
•
0
0
votes
0
replies
10
views
0
votes
3
replies
98
views
0
votes
2
replies
110
views
836
votes
167
replies
173k
views
111 follow
updated 2 days ago by
Biostar
3.5k
•
written 8.4 years ago by
Istvan Albert
102k
1
vote
1
reply
101
views
updated 9 hours ago by
Istvan Albert
102k
•
written 12 hours ago by
shelkmike
★
1.5k
0
votes
2
replies
106
views
0
votes
2
replies
111
views
3
votes
2
replies
182
views
0
votes
0
replies
77
views
19 hours ago by
Physalia-courses
★
2.6k
0
votes
1
reply
108
views
0
votes
1
reply
119
views
0
votes
1
reply
279
views
updated 1 day ago by
Gordon Smyth
★
7.9k
•
written 6 days ago by
Gerard
▴
10
0
votes
0
replies
109
views
updated 1 day ago by
GenoMax
150k
•
written 1 day ago by
Shicheng Guo
★
9.6k
1
vote
2
replies
475
views
4
votes
10
replies
787
views
6 follow
updated 1 day ago by
cmdcolin
★
4.2k
•
written 11 days ago by
jahnreinhard.ringger
•
0
0
votes
0
replies
106
views
2
votes
3
replies
549
views
updated 1 day ago by
Hao
▴
10
•
written 2.6 years ago by
shangguandong1996
▴
30
1
vote
2
replies
308
views
2
votes
9
replies
518
views
updated 12 hours ago by
Istvan Albert
102k
•
written 3 days ago by
megancgrdnr
•
0
3
votes
0
replies
123
views
0
votes
2
replies
270
views
1
vote
1
reply
214
views
1
vote
0
replies
96
views
1
vote
2
replies
225
views
updated 8 hours ago by
Ram
45k
•
written 2 days ago by
noodlejackson
▴
40
1
vote
1
reply
142
views
0
votes
0
replies
112
views
3
votes
4
replies
278
views
14
votes
3
replies
11k
views
0
votes
3
replies
299
views
0
votes
2
replies
883
views
updated 2 days ago by
Mensur Dlakic
★
29k
•
written 5.9 years ago by
Kanoo
•
0
0
votes
2
replies
252
views
3
votes
4
replies
298
views
updated 8 hours ago by
Ram
45k
•
written 3 days ago by
matthewmerkin32
•
0
0
votes
0
replies
158
views
updated 8 hours ago by
Ram
45k
•
written 3 days ago by
Amos Bairoch
▴
130
0
votes
2
replies
290
views
0
votes
0
replies
303
views
5
votes
5
replies
464
views
2 days ago by
Fatemeh
▴
40
0
votes
4
replies
401
views
updated 3 days ago by
pinheirofabiano
▴
110
•
written 6 days ago by
majorprogeria
•
0
0
votes
1
reply
226
views
1
vote
10
replies
598
views
3
votes
3
replies
262
views
4 days ago by
pinheirofabiano
▴
110
0
votes
0
replies
174
views
4 days ago by
Ana
•
0
0
votes
5
replies
1.7k
views
updated 4 days ago by
香
•
0
•
written 2.3 years ago by
gupta00aritra
•
0
0
votes
1
reply
1.1k
views
1
vote
2
replies
252
views
updated 8 hours ago by
Ram
45k
•
written 4 days ago by
rahma.khoualdia
•
0
0
votes
0
replies
217
views
updated 4 days ago by
GenoMax
150k
•
written 4 days ago by
HarperReed
•
0
0
votes
2
replies
270
views
2
votes
5
replies
323
views
0
votes
0
replies
178
views
0
votes
1
reply
239
views
updated 4 days ago by
Mensur Dlakic
★
29k
•
written 5 days ago by
Jack
•
0
0
votes
4
replies
360
views
Recent Votes
Recent Locations •
All
Machhagan, just now
Colombia, 2 minutes ago
Australia, 6 minutes ago
United States, 11 minutes ago
Russian Federation, 24 minutes ago
United States, 30 minutes ago
United States, 36 minutes ago
Recent Awards •
All
Teacher to
Jouni Sirén
▴
640
Popular Question to
LauferVA
4.7k
Popular Question to
Jaykumar
▴
50
Popular Question to
theodore
▴
110
Popular Question to
Assa Yeroslaviz
★
1.9k
Popular Question to
oghzzang
▴
50
Recent Replies
Comment: Insight into Trimmomatic
by
GenoMax
150k
You can post screenshots of plots you have questions about.
Comment: Insight into Trimmomatic
by
jh5ym
•
0
Follow up question, how do I share the .html file here to show you the Multi QC report?
Comment: Insight into Trimmomatic
by
GenoMax
150k
It would definitely be useful to first run FastQC/MultiQC on your data to understand the overall characteristics of the data. Make a note o…
Comment: Error during running wf-bacterial-genome (nextflow run epi2me-labs/wf-bacterial-
by
Anurag
•
0
hello I am very new to this field, I am trying to assemble genome using wf-bacterial-genome (nextflow run epi2me-labs/wf-bacterial-genomes…
Comment: Error during running wf-bacterial-genome (nextflow run epi2me-labs/wf-bacterial-
by
GenoMax
150k
Please add some detail about the command you are running and what exactly you are trying to do. You may have put part of the command line i…
Comment: Building an mmCIF parser for enzyme structure analysis — feedback & ideas welcom
by
Shravya
•
0
Thank you so much for the clarification!
You're right — I should've phrased it more as building a parser "for mmCIF files" in general, and…
Comment: Why don't I see people calculating FPKM from normalized read counts?
by
Istvan Albert
102k
Scientists stopped using FPKM in general because better measures are available:
https://www.biostars.org/p/104214/#332357
> *The Total Co…
Comment: Trouble when uploading FASTQ files on NCBI
by
lieven.sterck
15k
Not solving this particular problem but merely a suggestion:
Given your 'location' you might also consider uploading data to ENA / arrayEx…
Comment: SyntaxError in file /snakefile, line 22: invalid decimal literal: None
by
Jesse
▴
860
That's [Python's f-string](https://docs.python.org/3/tutorial/inputoutput.html#formatted-string-literals), which in this case just turns `{…
Comment: TPM vs FPKM divergence at high values
by
Istvan Albert
102k
I admit I had no firm idea what a TPM vs FPKM plot might look like.
I never computed both, but this motivated me enough to take a salmon …
Comment: Trouble when uploading FASTQ files on NCBI
by
GenoMax
150k
This may be hard to help/diagnose for biostar community since we don't know about your local set up. Problem could be on either end (your o…
Comment: TPM vs FPKM divergence at high values
by
dariober
15k
Yes, the axes are both logarithmic, the difference is in the input data with FPKM being log'd and TPM being raw.
Comment: SyntaxError in file /snakefile, line 22: invalid decimal literal: None
by
ATpoint
87k
I am not a SnakeMake person but what is the `f` supposed to be? `f'/{{...`
Comment: TPM vs FPKM divergence at high values
by
Istvan Albert
102k
I think both are logarithmic axes. Just one is in exponential notation the other is not.
Comment: HIC-pro with Forward and reverse reads not paired even when I use their test dat
by
GenoMax
150k
Looks like the original dataset has an equal number of records based on the lines so that input looks correct.
$ wc -l SRR400264_*
…
Traffic: 1728 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6