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updated 4 weeks ago by
4galaxy77
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written 10.2 years ago by
Jeremy Leipzig
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written 11.3 years ago by
Istvan Albert
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updated 3.0 years ago by
CY
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written 11.3 years ago by
Giovanni M Dall'Olio
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updated 2.8 years ago by
WouterDeCoster
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written 10.4 years ago by
Biomed
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updated 19 days ago by
Istvan Albert
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written 8.1 years ago by
Asaf
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written 10.2 years ago by
Chris Miller
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3.5 years ago by
CandiceChuDVM
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updated 18 days ago by
Juke34
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written 11.2 years ago by
Pierre Lindenbaum
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4.3 years ago by
Shicheng Guo
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updated 3 months ago by
ashotmarg2004
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written 7.6 years ago by
Obi Griffith
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updated 9 weeks ago by
srhhaines9
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written 8.6 years ago by
sohadb1357
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updated 7 weeks ago by
bw.
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written 8.3 years ago by
Malachi Griffith
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updated 3.6 years ago by
jared.andrews07
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written 8.1 years ago by
Medhat
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updated 7.3 years ago by
Biostar
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written 9.4 years ago by
Maxime Lamontagne
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updated 2.9 years ago by
Biostar
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written 11.3 years ago by
Giovanni M Dall'Olio
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updated 6 weeks ago by
Kevin Blighe
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written 15 months ago by
Istvan Albert
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updated 13 months ago by
lsbw
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written 8.7 years ago by
Obi Griffith
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181
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179
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updated 7.9 years ago by
sarahhunter
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written 10.6 years ago by
Pierre Lindenbaum
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updated 2.6 years ago by
michau
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written 10.7 years ago by
Zhangleisdau
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updated 9.1 years ago by
Larry_Parnell
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written 10.3 years ago by
Andra Waagmeester
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updated 6.6 years ago by
Parham
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written 11.2 years ago by
Michael Dondrup
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updated 6.7 years ago by
Prakki Rama
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written 10.2 years ago by
Ct586
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updated 2.9 years ago by
hd1fernando
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written 8.0 years ago by
Medhat
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updated 10.4 years ago by
k.nirmalraman
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written 10.5 years ago by
Giovanni M Dall'Olio
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updated 9.4 years ago by
Palani Kannan
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written 9.9 years ago by
Travis
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2.6 years ago by
Carlos Borroto
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150
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Forum:
A Farewell To Bioinformatics
updated 3.7 years ago by
Kevin Blighe
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written 8.4 years ago by
Martin A Hansen
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9 follow
updated 10.4 years ago by
Neilfws
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written 10.6 years ago by
Andrea_Bio
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updated 23 months ago by
sansritisinha
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written 9.3 years ago by
Obi Griffith
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149
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34 follow
147
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updated 3.2 years ago by
kristoffer.vittingseerup
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written 8.3 years ago by
Nicolas Rosewick
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145
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28 follow
updated 19 months ago by
brianpenghe
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50
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written 7.6 years ago by
biolab
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1.3k
145
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updated 8.0 years ago by
Neilfws
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written 8.2 years ago by
Istvan Albert
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144
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23 follow
updated 4.0 years ago by
Michael Dondrup
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written 10.3 years ago by
Joachim
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144
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Tutorial:
Tools For Metagenomic Data Analysis
updated 12 weeks ago by
juanjo75es
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120
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written 8.5 years ago by
vijay
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1.6k
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Devon Ryan
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Recent Replies
Answer: The Biostar Herald for Tuesday, June 01, 2021
by
Istvan Albert
88k
**The Biostar Herald** publishes user submitted links of bioinformatics relevance. It aims to provide a summary of interesting and relevant…
Comment: The Biostar Herald for Tuesday, June 01, 2021
by
Istvan Albert
88k
The Bi`ostar Herald publishes user submitte`d links of bioinformatics relevance. It aims to provide a summary of interesting and relevant i…
Comment: Asking for content suggestions for updated bioinformatics book
by
jared.andrews07
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10k
If you have no content on single cell analysis, then you could definitely add a section on that (using scanpy). Though that could likely be…
Comment: Can you assemble with merged paired end reads and unmatched reads as "single end
by
GenoMax
101k
You will need to provide some context. What exactly are you trying to do?
Comment: How to generate single sequence from assembled contigs?
by
Dunois
▴
820
[This][1] review might be somewhat helpful.
[1]: https://www.mdpi.com/2079-7737/9/9/295
Comment: Asking for content suggestions for updated bioinformatics book
by
Dunois
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820
A section on `Snakemake` and another on general purpose sequence visualization tools?
Answer: How to generate single sequence from assembled contigs?
by
Nitin Narwade
▴
670
I think a better way to patch the contigs and perform genome finishing is, one should go for some long-read sequencing (like pacBio OR nano…
Comment: How to generate single sequence from assembled contigs?
by
arriyaz.nstu
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10
Thank you for pointing out the prokaryotic fact.
**If we take a reference sequence from NCBI and align our contigs against it, can we gene…
Comment: When is recommended to remove or keep Unpaired "Orphan" reads in downstream anal
by
Devon Ryan
99k
You have to align them separately, which is a minor annoyance.
Comment: How to generate single sequence from assembled contigs?
by
lieven.sterck
11k
few points to get this thread started:
* if the data is not available then no tool will create a single DNA seq. Don't know this specific …
Comment: Can you assemble with merged paired end reads and unmatched reads as "single end
by
pdhrati02
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0
@genomax Hi, sorry to reply on such an old post but I have a similar question. The kneaddata output has unmatched_1.fq and unmatched_2.fq w…
Comment: Problem with limma in microarray analysis
by
Kevin Blighe
73k
I see, regarding the line with `rowMeans()`, this will center your data around 0, which is 'yes' okay for PCA. This is the same as doing `s…
Comment: When is recommended to remove or keep Unpaired "Orphan" reads in downstream anal
by
pdhrati02
•
0
@devon Hi, sorry to reply on such an old post but I have a similar question. The kneaddata output has unmatched_1.fq and unmatched_2.fq whi…
Comment: gene expression for a specific gene across for multiple cancer types in TCGA dat
by
ATpoint
49k
Fyi, the little hand icon on the bottom allows you to grap&drag your posts so you could have simply dragged the comment into the answer fie…
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