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0 votes
4 replies
3.1K views
Query coverage high, E-value low, and identity low - Blastp results interpretation and article recommended?
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updated by Mensur Dlakic 3.0K • | written by Luana JBC 0
0 votes
0 replies
594 views
Need Help Regarding Back-Splicing Junction Coordinates in CIRI2 Output
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updated by GenoMax 16K • | written by Faraz 0
1 vote
6 replies
1.9K views
Short reads to identify stuctural variants
sv long-read short-read
written by priya.bmg 7
0 votes
0 replies
1.1K views
Best approach for SNP calling in tumor single-cell multiome data (scRNA-seq + scATAC-seq) for CNV analysis
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written by nilaylale88 0
0 votes
0 replies
586 views
News: News:Workshop:Virtual Genome Assembly, April 15-17
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updated by Ram 4.5K • | written by zsc25001 1
0 votes
3 replies
1.0K views
C.reinhardtii single-cell Seurat object - gene names instead of loci
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updated by GenoMax 16K • | written by Ana 1
0 votes
4 replies
1.4K views
Snakemake Global Environment Container
snakemake conda singularity
written by meetmet 1
0 votes
2 replies
1.0K views
GTF repeatmasker annotation file
repeatmasker gtf
updated by rfran010 174 • | written by frarodmar17 4
0 votes
2 replies
2.0K views
Searching for online tools to prepare mitochondrial codon usage
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updated by aboozar.soorni 3 • | written by puipui 0
0 votes
1 reply
802 views
Getting sequences fragments using pysam
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updated by i.sudbery 2.3K • | written by Juls 0
1 vote
9 replies
4.0K views
Does EnhancedVolcano() supports crosstalk()?
enhancedvolcano crosstalk r ggplot
updated by GenoMax 16K • | written by IrK 10
0 votes
1 reply
1.3K views
How to select GEO datasets for differential expression analysis using GEO2R
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updated by ATpoint 9.1K • | written by dreamer247 0
0 votes
0 replies
866 views
Blog: Unlocking the Cellular Universe: The Importance of Single-Cell Sequencing in Animal and Plant Research
single-cell
written by Novogene 54
0 votes
4 replies
1.5K views
PopGenome lost individual information
popgenome
updated by Arup Ghosh 402 • | written by Yixuan 0
0 votes
2 replies
1.3K views
Question About Handling Technical Replicates in ATAC-seq
technical-replicate atacseq
written by LuciaNhu 2
1 vote
16 replies
23K views
How to convert vcf to 23andme format
genome sequencing snp
updated by ngelbal 0 • | written by alec_djinn 39
0 votes
7 replies
1.8K views
Poor alignment rates using Bowtie
aligment bowtie2 bowtie mirnas
updated by Istvan Albert 10K • | written by omicon 4
0 votes
5 replies
1.3K views
Polishing raw nanopore reads with Pacbio
polishing assembly
written by samuel.a.odonnell 86
0 votes
5 replies
1.6K views
bbduk.sh trimming to BAM output file
bbduk.sh
updated by Jon 3 • | written by bge 0
0 votes
3 replies
1.2K views
Identifying domain of long-read assembled contig
longread taxonomy identification contig
updated by Mensur Dlakic 3.0K • | written by Gio 2
0 votes
2 replies
1.9K views
Why does Radian run so much slower than vanilla R?
r python radian vs-code
updated by J.Gute 0 • | written by RR 0
0 votes
9 replies
7.9K views
About the Tool FASTP
quality-control reads fastp
updated by shelkmike 201 • | written by AIMAR 7
0 votes
0 replies
604 views
Significant SNPs with the same effect in FarmCPU
effect-size gwas farmcpu likage-disequilibrium
written by Noctiluca 0
0 votes
11 replies
2.7K views
Larger genome size than expected-please help
genome nanopore size minimap2
written by alexandrakortsi 0
0 votes
0 replies
1.3K views
Job: Postdoc ML/AI in Genomics & Bioinformatics at Duke University
postodoc genomics ai
written by alwayshope 4
0 votes
1 reply
672 views
analyze gene expression of 3 genes in RNA-Seq data
r rna-seq
updated by ATpoint 9.1K • | written by pinheirofabiano 14
0 votes
1 reply
1.1K views
methRead takes too long
methylkit
updated by Alexander Blume 1 • | written by CTLong 14
0 votes
0 replies
527 views
rrvgo::getGoSize error
revigo go-terms rrvgo
updated by Ram 4.5K • | written by Ana 1
0 votes
0 replies
678 views
Genotype Imputation for VCF File via API Using R ?
genotype-imputation vcf api
written by Ahmed Jaber 0
0 votes
0 replies
450 views
How label Group list after integratin scRNA-seq and scATAC-seq data
archr
written by Bioinformatics_16 0
0 votes
1 reply
1.3K views
Forum: Questions on what to focus on in the next 3-4 years of my research
career offtopic path
written by Abiodun 0
0 votes
7 replies
1.7K views
Error in importing data from 10x genomics into RStudio
rstudio scrna h5
updated by Ram 4.5K • | written by himanshu0102 1
0 votes
2 replies
848 views
WGS for CNV and Aneuploidy analysis
cnv aneuploidy wgs
written by bioinfo1990 1
0 votes
0 replies
535 views
News: Course: Phylogenetic Comparative Methods in R – May 12–16 (Online)
r phylogenetic-comparative-methods ultrametric-phylogenies
updated by Ram 4.5K • | written by Physalia-courses 281
0 votes
2 replies
1.1K views
Merge and unique multiple complete sam files from identical fastq files
samtools aligment sambamba wgbs wgs
written by JustinZhang 14
0 votes
1 reply
1.3K views
How to obtain TPM data after batch effect correction from count data obtained using RSEM
star rna-seq batch rsem effect
updated by Gordon Smyth 916 • | written by Apprentice 19
0 votes
2 replies
1.5K views
Missing short indels from vcf
bcftools shortindels mpileup
written by kbranger 0
0 votes
2 replies
1.3K views
Choosing the best clustering method for a certain methylation data
dmr k-means hierarchical clustering methylation
updated by 5heikki 1.1K • | written by Sophia 0
0 votes
16 replies
3.3K views
MultiQC_report
adapter quality-control fastqc multiqc
written by AIMAR 7
0 votes
3 replies
1.6K views
Forum: How to get into research for an absolute beginners
research
updated by Yugan Gogul Muthukumar 3 • | written by jpeduprep 0
0 votes
0 replies
730 views
News: Online course — Comparative Genomics — 7–11 April
snvs comparativegenomics svs genomeannotation
written by Physalia-courses 281
0 votes
2 replies
928 views
how to do a corellation analysis of multiple CRISPR data sets
crispr-screen batch-effect correlation
updated by Ram 4.5K • | written by Assa Yeroslaviz 197
1 vote
5 replies
1.9K views
Alternatives to UCSC genome browser for obtaining gene coordinates
browser ucsc
written by shpak.max 8
0 votes
12 replies
2.3K views
Tool: Introducing Grantease: Go From RFA to First Draft Grant Proposal in 15 Minutes
ai biology grants nih litreview
updated by jared.andrews07 1.9K • | written by Will 0
0 votes
0 replies
1.4K views
Job: Postdoctoral Position in Computational Protein Design and Molecular Modelling
protein-design molecular-modeling postdoc
updated by Ram 4.5K • | written by Sophie 0
0 votes
1 reply
877 views
How to put distinct colors to connection bridges in the Sankey plot ?
r python sankey
updated by zx8754 1.2K • | written by ohtang7 4
0 votes
1 reply
972 views
PCA comparison of cell line vs tumors
rnaseq sequencing pca normalization
updated by ATpoint 9.1K • | written by karlensberg 0
0 votes
9 replies
2.1K views
Find the reads which correspond to DP of vcf
bam variant vcf sam2tsv
updated by Pierre Lindenbaum 17K • | written by totoroGirl 0
0 votes
1 reply
994 views
cibersortx error - $ operator is invalid for atomic vectors
cibersortx
written by Franck 0
0 votes
0 replies
577 views
Need help defining a threshold
david genes go
written by Ana 1
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