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0 votes
0 replies
350 views
Chance for trained without experience
bio
updated by ATpoint ATpoint • written by shehab • shehab
0 votes
3 replies
3.6K views
How do I change the title font size in ViolinPlot (Seurat)
seurat violin-plot ggplot2 patchwork
updated by e.r.zakiev • e.r.zakiev • written by Assa Yeroslaviz Assa Yeroslaviz
0 votes
2 replies
1.0K views
Phasing a mixture of two individuals' DNA with long reads
long-reads phasing
written by njornet • njornet
0 votes
2 replies
989 views
Exploring Diet Effects in Single-Cell RNA Sequencing
batch_effect scrna seurat integration
updated by Adam • Adam • written by Darya • Darya
0 votes
5 replies
2.0K views
Percentage coverage of reference genome by de novo genome
samtools bwa alignment ddrad
updated by Joe Joe • written by Lemonhope • Lemonhope
0 votes
5 replies
1.3K views
A question about reference genome for creating the consensus sequence
fasta fa cram genome
written by me • me
0 votes
0 replies
512 views
Blog: Introduction to The Complete Sequence of a Human Genome
biotech
written by usa.cd.genomics • usa.cd.genomics
0 votes
0 replies
1.4K views
Blog: Overview of Nanopore Sequencing
biotech
written by usa.cd.genomics • usa.cd.genomics
0 votes
0 replies
418 views
meffil.snp.concordance
meffil methylation snp_concordance
written by kyj222637 • kyj222637
0 votes
1 reply
923 views
PseudobulkExpression.Seurat error
seurat pseudo-bulk
updated by Bastien Hervé Bastien Hervé • written by sooni • sooni
0 votes
5 replies
1.5K views
HCL database download
hcl
updated by Ram Ram • written by sooni • sooni
0 votes
1 reply
927 views
barcode of TCR-sequencing
barcode
updated by mizraelson • mizraelson • written by yueli7 yueli7
0 votes
3 replies
1.2K views
STAR aligner error
rna-seq star slurm
updated by Ram Ram • written by M. • M.
0 votes
2 replies
898 views
Correlating Bulk Differential Expression with quantitative
differential-expression deseq2
written by Nicholas • Nicholas
0 votes
4 replies
3.5K views
Understanding STAR output (Aligned.out.sam file)
star paired-end read
written by heelpPlease • heelpPlease
0 votes
9 replies
3.5K views
Applying the metacell2 algorithm using python
python single-cell scanpy metacell2
updated by Wayne Wayne • written by AlexStar • AlexStar
0 votes
0 replies
542 views
News: Online course. -Time series analysis and Forecasting in R
time-series forecasting r stastics
written by Physalia-courses Physalia-courses
0 votes
2 replies
2.1K views
HLA-HD tool for genomic imputation
genomics imputation bash
updated by Javier • Javier • written by fra.r.silvestro • fra.r.silvestro
0 votes
1 reply
1.6K views
ERROR: Duplicate entry "..." in sam header; samtools view: failed to add PG line to the header
sort. samtools. bam. sam.
updated by GenoMax GenoMax • written by Sony Nguyen • Sony Nguyen
0 votes
5 replies
1.8K views
Error in dimnames(x) <- dn : length of 'dimnames' [2] not equal to array extent
egsea
written by Chris • Chris
0 votes
2 replies
1.2K views
Differentail gene expression results
differential expression gene rna-seq deseq2
updated by swbarnes2 swbarnes2 • written by ahmad.sajad4541 • ahmad.sajad4541
0 votes
12 replies
3.7K views
UMI-Tools knee-method has great influence on the results of white list
single-cell whitelist umi rna umi-tools
updated by i.sudbery i.sudbery • written by Assa Yeroslaviz Assa Yeroslaviz
0 votes
1 reply
543 views
student
epitranscriptomics
updated by ATpoint ATpoint • written by useriwa • useriwa
0 votes
3 replies
1.1K views
trying to count a pattern in my fastq file using bbduk
java bbduk bbmap fastq
updated by GenoMax GenoMax • written by Assa Yeroslaviz Assa Yeroslaviz
0 votes
2 replies
1.7K views
Is therer any suggestions on mapping rate of WGBS data?
mapping read alignment wgbs
written by Zeng Jingyu • Zeng Jingyu
1 vote
2 replies
1.3K views
News: We created a Bioinformatics Competition for Spatial Transcriptomics: MICOS-EU
cell-clustering spatial-transcriptomics
updated by Weiwen • Weiwen • written by MICOS • MICOS
0 votes
4 replies
1.4K views
Correlation Analysis
statistics methylation ngs expression
written by Researcher • Researcher
0 votes
2 replies
805 views
Repeated testing/data mining in RNA Seq
repeated rna-seq mining testing data
written by robert.flynn.21 • robert.flynn.21
0 votes
1 reply
2.4K views
Tool: Converting Nebula Genomics Data to 23andMe Format
23andme nebula
updated by Michael Dondrup Michael Dondrup • written by Guillermo • Guillermo
0 votes
5 replies
2.2K views
Comparative Analysis of Algorithms for Implementing the FM-Index: Correctness, Complexity, and Use Cases
fmindex bwt
updated by Michael Dondrup Michael Dondrup • written by qwertyuiop26 • qwertyuiop26
0 votes
1 reply
1.1K views
What is the proper way to identify the cell types of scRNAseq cluster?
scrnaseq
updated by ATpoint ATpoint • written by MAPK2 • MAPK2
0 votes
2 replies
1.6K views
Job: Bioinformatics Analyst - Laboratory Medicine and Pathology
job
updated by Xiaofen • Xiaofen • written by toddknutson toddknutson
0 votes
1 reply
786 views
Seeking Guidance on Identifying Mutations in DARs from ATAC Data in Cancer Genomes
genomics cancer-research atac-seq
updated by Ram Ram • written by David • David
0 votes
4 replies
1.9K views
Where to get the following bed file?
reference bed wes
updated by Ram Ram • written by wyuan37 • wyuan37
0 votes
0 replies
487 views
Get Paired TCRa/b from MIXCR
python r mixcr tcr_seq
written by Scott McKay • Scott McKay
0 votes
0 replies
555 views
Cellphonedb results
cpdb visulization cellphonedb
written by piotto • piotto
1 vote
0 replies
914 views
Job: Post-doctoral Position in Alzheimer’s Disease Genetics, ‘Omics, and Biomarkers
genomics alzheimer multiomics neuroimaging
written by belloy • belloy
0 votes
3 replies
2.0K views
How to compute TPM normalized values for TCGA miRNA data?
tcga normalization tpm mirna
updated by swbarnes2 swbarnes2 • written by Ngrin • Ngrin
0 votes
6 replies
2.2K views
anRichment is missing
wgcna anrichment
updated by GenoMax GenoMax • written by michael.flower.14 • michael.flower.14
0 votes
1 reply
824 views
Gene ontology and homologs
gene-ontology
updated by geneontologyhelp • geneontologyhelp • written by beshka194 • beshka194
0 votes
2 replies
960 views
error in R code: Error in fit_avlr(...), : wn incorrectly formatted
r
updated by zx8754 zx8754 • written by snajafy • snajafy
0 votes
0 replies
505 views
Cox Model with interaction item interpretation
cox
written by Nona • Nona
0 votes
0 replies
654 views
how to downlad slices of CRAM fro ICGC ARGO
icgc samtools cram
written by Javier • Javier
0 votes
7 replies
2.1K views
Question regarding WGCNA
wgcna network-construction
written by deepak • deepak
2 votes
0 replies
11K views
Herald: The Biostar Herald for Monday, May 06, 2024
herald
written by Biostar Biostar
0 votes
1 reply
1.7K views
16S rRNA microbiome differential abundance analysis with DESeq2 finds same microbial Genus in both groups.
microbiome 16s deseq2
updated by andres.firrincieli andres.firrincieli • written by Antonio • Antonio
0 votes
0 replies
858 views
Error while loading model of Spatial data deconvolution using cell2location
python cell2location
updated by Ram Ram • written by sidrah.maryam • sidrah.maryam
0 votes
0 replies
614 views
Normalizing AMR gene count data
abundance rgi
updated by Ram Ram • written by arshad1292 • arshad1292
1 vote
1 reply
931 views
Help with VG Toolkit: VCF Output is Empty
vg
updated by Jordan M Eizenga • Jordan M Eizenga • written by sarumonsus • sarumonsus
0 votes
0 replies
620 views
How to implement an IGV to streamlit app?
python streamlit igv
written by avigail.shnaider • avigail.shnaider
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