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Comment: Comment: Which gatk version generates VCF version 4.1
14 months ago by taniamahmood38 ▴ 50
0
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0
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984
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Comment: Comment: Generate VCF version 4.1 using GATK version 4
14 months ago by taniamahmood38 ▴ 50
1
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1.2k
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Comment: Comment: Which gatk version generates VCF version 4.1
14 months ago by taniamahmood38 ▴ 50
0
votes
1
reply
984
views
Comment: Comment: Generate VCF version 4.1 using GATK version 4
14 months ago by taniamahmood38 ▴ 50
0
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1
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984
views
Comment: Comment: HOW CAN I GENERATE VCF VERSION 4.1 USING GATK VERSION 4?
14 months ago by taniamahmood38 ▴ 50
1
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6
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984
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Generate VCF version 4.1 using GATK version 4
gatk4.0 vcf4.1
14 months ago by taniamahmood38 ▴ 50
0
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1
reply
1.2k
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Comment: Comment: Which gatk version generates VCF version 4.1
14 months ago by taniamahmood38 ▴ 50
0
votes
1
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1.2k
views
Comment: Comment: Which gatk version generates VCF version 4.1
14 months ago by taniamahmood38 ▴ 50
3
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8
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1.2k
views
Which gatk version generates VCF version 4.1
vcf_v4.1 gatk
14 months ago by taniamahmood38 ▴ 50
0
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5
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1.1k
views
Error: ##fileformat=VCFv4.2 does not exist
Pharmcat VCF
updated 15 months ago by ▴ 480 • written 15 months ago by ▴ 50
0
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3
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1.8k
views
How to unzip a file with .bgz extention
.bgz unzip
updated 15 months ago by 142k • written 15 months ago by ▴ 50
0
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0
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1.1k
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Comment: Comment: Error: ##fileformat=VCFv4.2 does not exist
15 months ago by taniamahmood38 ▴ 50
0
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0
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1.1k
views
Comment: Comment: Issue with VCF format while using Pharmcat
15 months ago by taniamahmood38 ▴ 50
0
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0
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1.1k
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Comment: Comment: Issue with VCF format while using Pharmcat
15 months ago by taniamahmood38 ▴ 50
0
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7
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1.1k
views
Issue with VCF format while using Pharmcat
Pharmcat VCF
15 months ago by taniamahmood38 ▴ 50
0
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2
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1.1k
views
Comment: Comment: Issue with VCF format while using Pharmcat
15 months ago by taniamahmood38 ▴ 50
0
votes
1
reply
1.1k
views
Comment: Comment: Encountering error while using sudo apt-get update command
18 months ago by taniamahmood38 ▴ 50
1
vote
3
replies
1.1k
views
Encountering error while using sudo apt-get update command
ubuntu offtopic
updated 18 months ago by 54k • written 18 months ago by ▴ 50
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0
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2.5k
views
Comment: Comment: How to install latest version of bcftools on ubuntu?
18 months ago by taniamahmood38 ▴ 50
2
votes
2
replies
2.5k
views
How to install latest version of bcftools on ubuntu?
bcftools ubuntu bcftools1.16
updated 11 months ago by 43k • written 18 months ago by ▴ 50
0
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0
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299
views
Pool-HMM formula
Pool-HMM Python_program
19 months ago by taniamahmood38 ▴ 50
0
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0
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313
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Visualization of Pool-HMM results
Pool-HMM graphs
20 months ago by taniamahmood38 ▴ 50
0
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0
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767
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Comment: Comment: Fastq to Fasta format
20 months ago by taniamahmood38 ▴ 50
0
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1
reply
767
views
Comment: Comment: Fastq to Fasta format
20 months ago by taniamahmood38 ▴ 50
0
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4
replies
767
views
Fastq to Fasta format
galaxy fastq fasta
20 months ago by taniamahmood38 ▴ 50
0
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0
replies
292
views
How to calculate per site transition probability between hidden states.
-kargument pool-HMM
22 months ago by taniamahmood38 ▴ 50
0
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0
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304
views
Require DH script
DH TajimasD H-statistics
23 months ago by taniamahmood38 ▴ 50
0
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0
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362
views
Is Tajima's Pi and Wattersons Theta site frequency spectrum statistics?
TajimasD WattersonsTheta
23 months ago by taniamahmood38 ▴ 50
0
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0
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370
views
Require combine script of Tajima'sD and Fay and Wu's H stats
H-statistics TajimasD
23 months ago by taniamahmood38 ▴ 50
0
votes
0
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418
views
Require composite script of Hp and ROH statistics
ROH Pooled-heterozygosity github script
23 months ago by taniamahmood38 ▴ 50
0
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0
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698
views
Comment: Comment: How to convert VCF into hapmatrix format?
24 months ago by taniamahmood38 ▴ 50
0
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1
reply
698
views
Comment: Comment: How to convert VCF into hapmatrix format?
24 months ago by taniamahmood38 ▴ 50
0
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4
replies
698
views
How to convert VCF into hapmatrix format?
popseq hapmatrix vcf
24 months ago by taniamahmood38 ▴ 50
0
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0
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718
views
Comment: Comment: How to generate bam to vcf containing ancestral allele (AA) information?
24 months ago by taniamahmood38 ▴ 50
0
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1
reply
718
views
Comment: Comment: How to generate bam to vcf containing ancestral allele (AA) information?
24 months ago by taniamahmood38 ▴ 50
1
vote
4
replies
718
views
How to generate bam to vcf containing ancestral allele (AA) information?
ancestral_allele vcf bam
updated 24 months ago by 43k • written 24 months ago by ▴ 50
0
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0
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1.5k
views
Comment: Comment: How to add the ancestral allele (AA) information in a vcf file?
24 months ago by taniamahmood38 ▴ 50
0
votes
0
replies
460
views
Understanding the output generated using rehh package
sfs Rehh
24 months ago by taniamahmood38 ▴ 50
0
votes
1
reply
1.5k
views
Comment: Comment: How to add the ancestral allele (AA) information in a vcf file?
24 months ago by taniamahmood38 ▴ 50
2
votes
4
replies
1.5k
views
How to add the ancestral allele (AA) information in a vcf file?
AA_tag vcf
24 months ago by taniamahmood38 ▴ 50
0
votes
0
replies
315
views
Issue in computing the site frequency spectrum statistics using Rehh package
Rehh R
2.0 years ago by taniamahmood38 ▴ 50
0
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0
replies
750
views
Comment: Comment: Error in mapply(function(x, y)
2.1 years ago by taniamahmood38 ▴ 50
2
votes
2
replies
750
views
Error in mapply(function(x, y)
rehh R
2.1 years ago by taniamahmood38 ▴ 50
0
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0
replies
338
views
Convert pileup file to genetic map file
genetic_map pileup .map
2.1 years ago by taniamahmood38 ▴ 50
0
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0
replies
768
views
Comment: Comment: Problem assigning read group to a sample
2.1 years ago by taniamahmood38 ▴ 50
0
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1
reply
768
views
Comment: Comment: Problem assigning read group to a sample
2.1 years ago by taniamahmood38 ▴ 50
2
votes
4
replies
768
views
Problem assigning read group to a sample
RG_tag popbam bam pooled-seq
2.1 years ago by taniamahmood38 ▴ 50
0
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0
replies
8.3k
views
Comment: Comment: samtools addreplacerg gives error
2.1 years ago by taniamahmood38 ▴ 50
2
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1
reply
8.3k
views
Comment: Comment: samtools addreplacerg gives error
2.1 years ago by taniamahmood38 ▴ 50
0
votes
0
replies
795
views
Comment: Comment: popbam: command not found
2.1 years ago by taniamahmood38 ▴ 50
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