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sbstevenlee
sbstevenlee
Reputation:
480
Joined:
6.6 years ago
Last seen:
2.1 years ago
Location:
South Korea
Google Scholar:
MFlMbl8AAAAJ
Latest posts by user
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Answer: Answer: Error: ##fileformat=VCFv4.2 does not exist
written by sbstevenlee • sbstevenlee
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Comment: Comment: 012 matrix variation for multiple alleles
written by sbstevenlee • sbstevenlee
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1 reply
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Comment: Comment: 012 matrix variation for multiple alleles
written by sbstevenlee • sbstevenlee
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Comment: Comment: 012 matrix variation for multiple alleles
written by sbstevenlee • sbstevenlee
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2 replies
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Comment: Comment: 012 matrix variation for multiple alleles
written by sbstevenlee • sbstevenlee
1 vote
0 replies
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Comment: Comment: Calling star alleles with PGx-POP on my VCF file
written by sbstevenlee • sbstevenlee
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Answer: Answer: Generating Depth of Coverage files from vcf.
written by sbstevenlee • sbstevenlee
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Comment: Comment: Why isn't GWAS used in oncology?
written by sbstevenlee • sbstevenlee
1 vote
1 reply
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Comment: Comment: Calling star alleles with PGx-POP on my VCF file
written by sbstevenlee • sbstevenlee
1 vote
1 reply
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Comment: Comment: Calling star alleles with PGx-POP on my VCF file
written by sbstevenlee • sbstevenlee
0 votes
1 reply
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Comment: Comment: Calling star alleles with PGx-POP on my VCF file
written by sbstevenlee • sbstevenlee
1 vote
1 reply
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Answer: Answer: Calling star alleles with PGx-POP on my VCF file
written by sbstevenlee • sbstevenlee
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Comment: Comment: If I need to repeatedly perform variant calling from BAM for single gene only, d
written by sbstevenlee • sbstevenlee
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Comment: Comment: If I need to repeatedly perform variant calling from BAM for single gene only, d
written by sbstevenlee • sbstevenlee
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Comment: Comment: If I need to repeatedly perform variant calling from BAM for single gene only, d
written by sbstevenlee • sbstevenlee
1 vote
6 replies
2.6K views
If I need to repeatedly perform variant calling from BAM for single gene only, do I really need entire reference FASTA?
variant-calling bam vcf bcftools fasta
written by sbstevenlee • sbstevenlee
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Answer: Answer: Missing data per site
written by sbstevenlee • sbstevenlee
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1 reply
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Comment: Comment: Hierarchical clustering in r
written by sbstevenlee • sbstevenlee
1 vote
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Answer: Answer: Weird behavior of `--max-depth` argument from `bcftools mpileup` command when it
written by sbstevenlee • sbstevenlee
1 vote
2 replies
2.8K views
Weird behavior of `--max-depth` argument from `bcftools mpileup` command when its value is too low
bcftools mpileup
updated by Ram Ram • written by sbstevenlee • sbstevenlee
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