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1,000 results • Page
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Views
Votes
Replies
3
votes
3
replies
929
views
Forum:
Importance of Data Structures for Bioinformatics?
data-structures
updated 7 months ago by
Ram
43k • written 7 months ago by
S
• 0
19
votes
14
replies
2.1k
views
Forum:
What is the amount of sequencing data produced annually?
data
research
sequencing
updated 7 months ago by
Jeremy Leipzig
22k • written 7 months ago by
vincenthus
▴ 70
19
votes
10
replies
1.5k
views
Forum:
Pain points using commercial clouds
gpt
tinybio
updated 7 months ago by
vincenthus
▴ 70 • written 8 months ago by
Sasha
▴ 840
9
votes
6
replies
1.9k
views
6 follow
Forum:
GTF files from Ensembl Releases 105 and 106 unsorted
Ensembl
bug
GTF
updated 7 months ago by
ATpoint
82k • written 17 months ago by
dlaehnemann
▴ 30
3
votes
2
replies
630
views
Forum:
How to contribute to the next edition of Biostars Handbook
handbook
updated 7 months ago by
Ram
43k • written 8 months ago by
Fouad
▴ 20
3
votes
6
replies
1.5k
views
6 follow
Forum:
Is Bioinformatics a Professional Degree?
career
degree
8 months ago by
anasjamshed
▴ 120
2
votes
5
replies
956
views
6 follow
Forum:
Biostar as a next generation version
meta
mobile-app
updated 6 months ago by
Ram
43k • written 8 months ago by
rj.rezwan
• 0
2
votes
9
replies
1.2k
views
Forum:
open source projects looking for contributors
open-source
updated 7 months ago by
vincenthus
▴ 70 • written 8 months ago by
claudiofr
▴ 20
0
votes
0
replies
544
views
Forum:
Recruiters: what do you expect on a junior bioinformatician?
career
skills
updated 8 months ago by
Ram
43k • written 8 months ago by
gallardodiazmiriam
▴ 20
3
votes
4
replies
1.4k
views
Forum:
Discussion: Uploading terabytes of data to NCBI SRA
NCBI
WGS
archiving
servers
remote
updated 8 months ago by
GenoMax
142k • written 8 months ago by
James Reeve
▴ 130
0
votes
0
replies
578
views
Forum:
I have a Master's and little experience in Bioinformatics - what would be the next best step?
career
updated 8 months ago by
Ram
43k • written 8 months ago by
RM123
▴ 10
1
vote
3
replies
794
views
Forum:
Spaceranger missing spatial coordinates [Discussion]
Visium
updated 8 months ago by
GenoMax
142k • written 8 months ago by
morovatunc
▴ 550
11
votes
8
replies
1.4k
views
6 follow
Forum:
How to write a review article in bioinformatics
article
review
updated 8 months ago by
Ram
43k • written 8 months ago by
joey
▴ 10
365
votes
58
replies
69k
views
44 follow
Forum:
Recommend Your Favorite Bioinformatics Books
education
books
updated 6 months ago by
Ram
43k • written 14.2 years ago by
Istvan Albert
100k
1
vote
2
replies
18k
views
Forum:
Would you rather analyze a dataset with a strong, non-collinear batch effect, or a weak, collinear batch effect.
collinear
latent
batch-effect
variable
GLM
9 months ago by
LauferVA
4.2k
0
votes
3
replies
3.9k
views
10 follow
Forum:
Discussion question: Cutoff for SNP phylogeny
Phylogenetics
SNP
written 17 months ago by
SushiRoll
▴ 120
2
votes
3
replies
802
views
Forum:
Purely analytic or in silico manuscripts that have significantly improved biological understanding
dry-lab
updated 9 months ago by
GenoMax
142k • written 10 months ago by
LauferVA
4.2k
0
votes
2
replies
1.3k
views
Forum:
[Detailed Question] How to Normalize of Metagenomics Gene Abundances (with HMMs models)
normalization
updated 10 months ago by
Asaf
10k • written 10 months ago by
Davide
• 0
33
votes
23
replies
4.2k
views
8 follow
Forum:
Is there a file format better suited for the era of pangenomics than the .vcf? What are its attributes?
VCF
file-format
genomics
updated 10 months ago by
Jeremy Leipzig
22k • written 10 months ago by
LauferVA
4.2k
7
votes
8
replies
2.0k
views
Forum:
Would solving many Rosalind problems show your ability for this field in job-wise?
rosalind
career
10 months ago by
K
• 0
2
votes
3
replies
868
views
Forum:
Mapping a predicted sequence to a genome
predicted
map
alignment
sequence
updated 11 months ago by
Mensur Dlakic
★ 27k • written 11 months ago by
Andy
• 0
0
votes
0
replies
449
views
Forum:
Recommendation sought for differential exon usage of a single gene
splicing
differential-exon-usage
updated 11 months ago by
Ram
43k • written 11 months ago by
nick_b55
▴ 10
7
votes
4
replies
1.1k
views
Forum:
[Meta] Use of AI
AI
Artificial-Intelligence
meta
ChatGPT
updated 11 months ago by
Ram
43k • written 11 months ago by
LauferVA
4.2k
2
votes
2
replies
607
views
Forum:
Colleges
Colleges
india
universities
updated 11 months ago by
Ram
43k • written 11 months ago by
mahimanepalli36
• 0
19
votes
15
replies
2.0k
views
6 follow
Forum:
Cross out line in Biostars
meta
updated 11 months ago by
Ram
43k • written 6.0 years ago by
Bastien Hervé
5.3k
121
votes
33
replies
39k
views
24 follow
Forum:
Where To Look For Quality Bioinformatics Short Courses And Workshops?
Courses
updated 12 months ago by
carlopecoraro2
★ 2.5k • written 10.7 years ago by
Eric Normandeau
11k
103
votes
42
replies
31k
views
34 follow
Forum:
List of cloud genomics companies
cloud-genomics
updated 25 days ago by
Jeremy Leipzig
22k • written 10.5 years ago by
14134125465346445
★ 3.6k
26
votes
12
replies
7.5k
views
6 follow
Forum:
Mapping God Found ‘Scientifically Dishonest’ By Anonymous Peer Reviewers
ngs
updated 12 months ago by
zyan2005
▴ 10 • written 10.5 years ago by
johnblue81
▴ 50
0
votes
2
replies
780
views
Forum:
How to start in bioinformatics?
career
updated 11 months ago by
Ram
43k • written 12 months ago by
caffrey
• 0
4
votes
5
replies
1.4k
views
Forum:
I'm looking for a mentor in Bioinformatics
mentor
teaching
updated 12 weeks ago by
alva
• 0 • written 12 months ago by
cwaingartentrabajo
• 0
12
votes
5
replies
2.0k
views
6 follow
Forum:
Bioinformatics opportunities in Europe?
career
updated 12 months ago by
alwayshope
▴ 40 • written 12 months ago by
melaniem
• 0
19
votes
14
replies
2.0k
views
7 follow
Forum:
What's the general view on point & click bioinformatics for routine analyses?
ngs
RNA-Seq
next-gen-sequencing
12 months ago by
Simon
▴ 40
0
votes
0
replies
7.0k
views
Forum:
Optimal approach for variant calling with 3 diluted germline sample in one sequencing - Capture Sequencing
germline
Calling
Variant
Capture
Sequencing
13 months ago by
Alexandre Eeckhoutte
• 0
11
votes
11
replies
1.9k
views
7 follow
Forum:
Any tips in landing a bioinformatic job?
Spain
R
updated 13 months ago by
LauferVA
4.2k • written 13 months ago by
Jorge
▴ 30
4
votes
2
replies
706
views
Forum:
advice on course selection for a bioinformatics career.
career
updated 13 months ago by
Istvan Albert
100k • written 13 months ago by
Aaron
• 0
0
votes
1
reply
542
views
Forum:
Graduate in molecular biology and genetics
biology
genetics
Molecular
updated 14 months ago by
GenoMax
142k • written 14 months ago by
zamzammahmud20
• 0
4
votes
1
reply
794
views
Forum:
Open problems in genomics 2023
genomics
pangenomics
updated 14 months ago by
GenoMax
142k • written 14 months ago by
colindaven
6.4k
5
votes
3
replies
931
views
Forum:
Someone posted the same question to StackOverflow and Biostars. The results will blow your mind.
meta
updated 14 months ago by
Joe
21k • written 14 months ago by
Cornelius
▴ 70
1
vote
0
replies
474
views
Forum:
Penetrance versus heritability
penetrance
heritability
14 months ago by
tacrolimus
▴ 140
10
votes
15
replies
2.1k
views
Forum:
How should reference genome fasta files be distributed by UCSC?
reference-genome
fasta
freeze
ucsc-genome-browser
updated 11 months ago by
Jeremy Leipzig
22k • written 14 months ago by
Maximilian Haeussler
★ 1.6k
8
votes
4
replies
988
views
Forum:
Implementing FAIR data principles to a bioinformatics lab
data
updated 14 months ago by
Jeremy Leipzig
22k • written 14 months ago by
pixie@bioinfo
★ 1.5k
0
votes
0
replies
458
views
Forum:
NGSrich - hg38
Coverage
NGSrich
14 months ago by
RK
• 0
5
votes
5
replies
2.2k
views
Forum:
Bioinformatics - how to start?
molecular-biology
updated 14 months ago by
Mensur Dlakic
★ 27k • written 14 months ago by
Abigail
• 0
8
votes
8
replies
1.8k
views
7 follow
Forum:
A Computer Scientist who wants to start Bioinformatics
computer-science
books
resources
ngs
updated 15 months ago by
omaridris5315
▴ 10 • written 16 months ago by
bjorn
• 0
7
votes
3
replies
1.1k
views
Forum:
Find a research paper for reproducing the results
research
paper
updated 15 months ago by
GenoMax
142k • written 15 months ago by
grant.hovhannisyan
★ 2.6k
1
vote
1
reply
798
views
Forum:
Gene ontology vs Gene set enrichment
set
enrichment
GSEA
ontology
Gene
analysis
gene
updated 16 months ago by
DareDevil
★ 4.3k • written 16 months ago by
Emmykyz
• 0
6
votes
12
replies
2.2k
views
Forum:
How to decide when to have local hardware vs cloud computing?
hardware
computational-resources
cloud
17 months ago by
Lluís R.
★ 1.2k
15
votes
11
replies
2.7k
views
7 follow
Forum:
BioStars and ChatGPT
ChatGPT
Meta
GPT
updated 12 months ago by
ponganta
▴ 590 • written 17 months ago by
Jack Tierney
▴ 360
18
votes
10
replies
2.5k
views
7 follow
Forum:
Add artificial intelligence training related disclaimers to your profile
licensing
AI
updated 17 months ago by
Michael
54k • written 17 months ago by
Istvan Albert
100k
7
votes
2
replies
902
views
Forum:
Improvement of Wikipedia articles with bioinformatic subjects
Wikipedia
Bioinformatics
15 months ago by
Matthias Zepper
4.6k
1,000 results • Page
2 of 20
Recent Votes
Answer: Searching for gene in multiple genomes
Comment: RNA velocity for smart-seq2 dataset
Answer: RNA velocity for smart-seq2 dataset
Answer: RNA velocity for smart-seq2 dataset
Comment: Help with choosing a model species for Augustus for a de novo assembled genome.
A: After read mapping, count exons or genes?
After read mapping, count exons or genes?
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Popular Question
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Thanujay S
• 0
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SHN
▴ 40
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Rob
▴ 170
Scholar
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GenoMax
142k
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Recent Replies
Answer: Segmentation error while using a tool
by
Mensur Dlakic
★ 27k
Most likely you didn't do anything wrong. If going by your previous post that you have only 8 GB of RAM, the most likely reason is the lack…
Comment: Segmentation error while using a tool
by
Thanujay S
• 0
Hey @Ruqaiya! Can you please give more details on why smalt is opted here? According to what I can see, the tool has become obsolete! Why …
Comment: Extracting mutation status from MAF files - TCGA
by
Thanujay S
• 0
Hey! Can you explain the question further? What have you tried?
Comment: Downloading older version of a tool
by
Ruqaiya
• 0
I tried the 2nd option only. I got the files of older version from the author but that version isn't working on my WSL, it's showing Segmen…
Comment: filtering before dada2
by
GenoMax
142k
> I encountered a significant decrease in the percentage of merged reads. You can check with `bbmerge.sh` from BBMap suite to see how many…
Comment: HCL database download
by
GenoMax
142k
Isn't the download link available above the plot: http://bis.zju.edu.cn/HCL/data/DGE/Adult-Transverse-Colon1_dge.txt.gz
Comment: fastq screen aligner no specified.
by
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142k
You need to change this configuration file to point it to the location where the aligner executable can be found. So as an example followi…
Answer: Design matrix Differential expression analysis
by
Gordon Smyth
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The expression levels do not change but the way that you have parametrized the expression levels does change. The two design matrices give…
Comment: The GDC Legacy Archive is retiring soon.
by
lcordeiro
▴ 40
Hi Zhenyu, do you happen to know how I can download metadata for some of the legacy files? I downloaded several IDATs from the legacy data …
Answer: Force PLINK2 to neglect chrX as the sex chromosome
by
chrchang523
10k
(cross-posted from https://groups.google.com/g/plink2-users/c/Qphx_6BpPII ) You need to use --chr-set, not --allow-extra-chr, to specify…
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chrchang523
10k
This question does not make sense. If you care about allele-order "information [being] lost in downstream applications", REF/ALT is the ob…
Answer: visualize GSEA
by
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★ 2.4k
I have made some edits in your code basically changing the position of text and commented out the line `data$text_pos <- ifelse(data$NES > …
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by
swbarnes2
14k
Pictures of code are useless. You were told to paste the code and use the 0101 button. Can you explain why you decided not to do that? If…
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by
Erina
• 0
![Here is the code I am using for the analysis][1] [1]: /media/images/8a511904-6ae8-47f5-b647-ee15b02b
Answer: Clarification regarding SAM flags "mate reverse strand" (flag 16/0x10) and "read
by
swbarnes2
14k
In paired end sequencing, every read has a mate, and the flags all together tell you not only what is up with the read you are looking at, …
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