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carolofharvest
carolofharvest
Reputation:
60
Joined:
3.2 years ago
Last seen:
2 weeks ago
Location:
FRANCE

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Latest posts by user
0 votes
1 reply
114 views
Correct way of doing enrichment analysis (ORA)
enrichment analysis transcriptomics over representation
updated by i.sudbery i.sudbery • written by carolofharvest • carolofharvest
1 vote
0 replies
0 views
Comment: Comment: Seurat integration join split
written by carolofharvest • carolofharvest
0 votes
0 replies
304 views
Is it valid to compare fold enrichment values from separate ORA runs across conditions
ora deg enrichment
written by carolofharvest • carolofharvest
0 votes
0 replies
0 views
Comment: Comment: Should use Ambient RNA detection software for filtered_bc_matrices from Cell Ran
written by carolofharvest • carolofharvest
0 votes
1 reply
0 views
Comment: Comment: Using DecontX (ambient RNA correction) with doublet detection on scRNA-seq
written by carolofharvest • carolofharvest
0 votes
4 replies
1.4K views
Using DecontX (ambient RNA correction) with doublet detection on scRNA-seq
detection doublet ambient rna scrna-seq
updated by Bastien Hervé Bastien Hervé • written by carolofharvest • carolofharvest
0 votes
1 reply
869 views
Is it reasonable to keep only protein-coding genes in highly variable features in scRNA-seq data?
scrna-seq
updated by ATpoint ATpoint • written by carolofharvest • carolofharvest
0 votes
1 reply
0 views
Comment: Comment: scRNAseq analysis with a few samples (n=2 per group)
written by carolofharvest • carolofharvest
0 votes
1 reply
877 views
1 vs 1 DEG analysis in scrna seq data
deg
updated by ATpoint ATpoint • written by carolofharvest • carolofharvest
0 votes
1 reply
966 views
FACS quality control based on size and doublet detection in scRNA-seq
single-cell rna-detection facs doublet scrna-seq
updated by Ram Ram • written by carolofharvest • carolofharvest
0 votes
1 reply
0 views
Comment: Comment: SlingShot and Subsetting data
written by carolofharvest • carolofharvest
0 votes
5 replies
1.8K views
SlingShot and Subsetting data
scrna slingshot trajectory
updated by jared.andrews07 jared.andrews07 • written by carolofharvest • carolofharvest
0 votes
0 replies
0 views
Comment: Comment: How to plot LMER estimate values in heatmap ?
written by carolofharvest • carolofharvest
0 votes
2 replies
893 views
How to plot LMER estimate values in heatmap ?
cell scrnaseq tf lmer transcription
written by carolofharvest • carolofharvest
0 votes
0 replies
624 views
Anti-ligand , receptor blocking and cell cell interaction analysis
cellchat cell nichenet single
written by carolofharvest • carolofharvest
0 votes
1 reply
0 views
Comment: Comment: decoupleR & Transcription Factory Activity Inference: pvalue or padj?
written by carolofharvest • carolofharvest
0 votes
0 replies
0 views
Answer: Answer: How Can Pathway Analysis Methods Account for Genes with Different Activation Rol
written by carolofharvest • carolofharvest
1 vote
0 replies
0 views
Answer: Answer: scRNA-seq from cell count matrix and DESeq2
written by carolofharvest • carolofharvest
0 votes
1 reply
1.2K views
How many genes is required for ORA analysis?
ora deseq single-cell
updated by Ram Ram • written by carolofharvest • carolofharvest
0 votes
1 reply
952 views
scRNA seq dissimilarity plot
anosim scrna-seq dissimilarity
updated by Bastien Hervé Bastien Hervé • written by carolofharvest • carolofharvest
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