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James Reeve
James Reeve
Reputation:
130
Joined:
8.8 years ago
Last seen:
1.8 years ago
Location:
Sweden

I'm a PhD student in the Tjärnö Marine Laboratory at the University of Gothenburg. I'm analysing the genetics of sea snails to find the role inversions play in facilitating speciation.

Latest posts by user
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Comment: Comment: Removing indels in VCF file
written by James Reeve James Reeve
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1 reply
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Comment: Comment: Discussion: Uploading terabytes of data to NCBI SRA
written by James Reeve James Reeve
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4 replies
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Forum: Discussion: Uploading terabytes of data to NCBI SRA
ncbi wgs archiving servers remote
updated by GenoMax GenoMax • written by James Reeve James Reeve
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Comment: Comment: Merged BAM has more reads than sum of parts
written by James Reeve James Reeve
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3 replies
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Merged BAM has more reads than sum of parts
fastq wgs samtools bwa
written by James Reeve James Reeve
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1 reply
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Comment: Comment: Can you predict the size of a BAM file based on the fasta?
written by James Reeve James Reeve
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3 replies
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Can you predict the size of a BAM file based on the fasta?
storage mapping bam
updated by Kevin Blighe Kevin Blighe • written by James Reeve James Reeve
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Comment: C: Calculate Fis (inbreeding coefficient)
written by James Reeve James Reeve
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1.8K views
PopGenome: What's the difference between two ways of checking population?
popgenome r
updated by Biostar Biostar • written by James Reeve James Reeve
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1 reply
1.4K views
How do I multithread PoPoolation?
popoolation optimization
written by James Reeve James Reeve
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1 reply
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Comment: C: What is the GMAP GFF3 score?
written by James Reeve James Reeve
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3 replies
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What is the GMAP GFF3 score?
gmap gff3
written by James Reeve James Reeve
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1 reply
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Comment: C: extract only geneID and gene symbol from GTF file
written by James Reeve James Reeve
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Comment: C: Question: Is samtools BAQ redundant after GATK's IndelRealinger
written by James Reeve James Reeve
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Comment: C: Question: Is samtools BAQ redundant after GATK's IndelRealinger
written by James Reeve James Reeve
2 votes
5 replies
3.3K views
Question: Is samtools BAQ redundant after GATK's IndelRealinger
samtools indels
written by James Reeve James Reeve
1 vote
2 replies
3.1K views
VarScan: How is the DP score in a .vcf calculated?
varscan vcf
updated by igor igor • written by James Reeve James Reeve
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Comment: C: samtools mpileup keeps making an empty file
written by James Reeve James Reeve
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1 reply
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Comment: C: samtools mpileup keeps making an empty file
written by James Reeve James Reeve
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1 reply
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Comment: C: samtools mpileup keeps making an empty file
written by James Reeve James Reeve
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