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14134125465346445
14134125465346445
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Latest posts by user
0 votes
2 replies
2.3K views
what is the most complete vcf file of population allele frequencies that can be built/downloaded from public datasets?
genome vcf allele frequencies population genomics
updated by Pierre Lindenbaum Pierre Lindenbaum • written by 14134125465346445 14134125465346445
0 votes
0 replies
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Comment: C: Affy 500K positions in hg38
written by 14134125465346445 14134125465346445
0 votes
1 reply
0 views
Comment: C: How to update a 23andme, vcf or plink bed file to hg38?
written by 14134125465346445 14134125465346445
0 votes
1 reply
0 views
Comment: C: Calling SNPs with low coverage
written by 14134125465346445 14134125465346445
0 votes
1 reply
122 views
samtools mpileup empty when filtering out flags
bam samtools mpileup
written by 14134125465346445 14134125465346445
0 votes
3 replies
4.8K views
Calling differential peaks on large set of 3 conditions
peak calling differential macs2
updated by Fluorine Fluorine • written by 14134125465346445 14134125465346445
0 votes
0 replies
0 views
Comment: C: bam file calculate sliding window insert sizes
written by 14134125465346445 14134125465346445
1 vote
4 replies
3.2K views
bam file calculate sliding window insert sizes
bam insert size
updated by Devon Ryan Devon Ryan • written by 14134125465346445 14134125465346445
1 vote
0 replies
182 views
samtools mpileup with minimal filters
samtools mpileup snv
written by 14134125465346445 14134125465346445
2 votes
2 replies
7.3K views
bam stats F1F2/F1R2/R1F2/R1R2/F2F1/F2R1/R2F1/R2R1
bam
updated by John John • written by 14134125465346445 14134125465346445
3 votes
1 reply
3.4K views
Picard MarkDuplicates stuck at Traversing read pair information and detecting duplicates
picard markduplicates bam
written by 14134125465346445 14134125465346445
2 votes
2 replies
2.6K views
non-metric multidimensional scaling for RNAseq or enrichment experiments
rna-seq enrichment
written by 14134125465346445 14134125465346445
0 votes
1 reply
2.3K views
IGV idxsession files with bigwig URLs
bigwig igv
written by 14134125465346445 14134125465346445
0 votes
0 replies
0 views
Comment: C: single sample RPKM tissue/disease classifier
written by 14134125465346445 14134125465346445
0 votes
2 replies
1.9K views
estimation of tissue/cell type abundance and disease/condition using RPKM expression data
rna-seq next-gen
written by 14134125465346445 14134125465346445
0 votes
0 replies
1 view
Answer: A: repeated read ids from Illumina MiniSeq fastq.gz files?
written by 14134125465346445 14134125465346445
0 votes
1 reply
1 view
Comment: C: repeated read ids from Illumina MiniSeq fastq.gz files?
written by 14134125465346445 14134125465346445
3 votes
7 replies
3.3K views
repeated read ids from Illumina MiniSeq fastq.gz files?
fastq illumina
updated by Ram Ram • written by 14134125465346445 14134125465346445
2 votes
1 reply
3.2K views
Is there a standard yaml file to describe Illumina runs: sample_name, barcode, lane, flowcell?
illumina flowcell run lane barcode
updated by Biostar Biostar • written by 14134125465346445 14134125465346445
1 vote
2 replies
5.9K views
IGV resizing tracks
igv
updated by Ivan • Ivan • written by 14134125465346445 14134125465346445
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