User: Jordan

3

votes

4

replies

1.6k

views

ensembl hugo tpm-calculator tpm rna-seq

updated 3.1 years ago by Istvan Albert 100k • written 3.1 years ago by Jordan ★ 1.3k

2

votes

4

replies

2.6k

views

cnvkit .cnr wgs cnv

updated 3.6 years ago by Kevin Blighe 87k • written 4.1 years ago by Jordan ★ 1.3k

4

votes

8

replies

3.1k

views

r microarray

updated 3.6 years ago by Gordon Smyth ★ 7.1k • written 10.2 years ago by Jordan ★ 1.3k

0

votes

2

replies

2.0k

views

vep vcf2maf variant-calling vcfs maf

3.9 years ago by Jordan ★ 1.3k

2

votes

3

replies

1.7k

views

cnvkit wgs cnv

updated 4.0 years ago by brunobsouzaa ▴ 830 • written 4.1 years ago by Jordan ★ 1.3k

0

votes

6

replies

1.4k

views

cnvkit wgs scatter-plot

updated 4.1 years ago by d-cameron ★ 2.9k • written 4.1 years ago by Jordan ★ 1.3k

2

votes

1

reply

1.2k

views

mutect2 panelofnormals variant-calling gatk

updated 4.4 years ago by Kevin Blighe 87k • written 4.5 years ago by Jordan ★ 1.3k

2

votes

7

replies

9.3k

views

bam mapping read

updated 5.8 years ago by ammar.husami • 0 • written 11.2 years ago by Jordan ★ 1.3k

2

votes

3

replies

1.4k

views

RNA-Seq ngs

updated 6.3 years ago by dariober 14k • written 6.3 years ago by Jordan ★ 1.3k

4

votes

4

replies

5.0k

views

mapper.pl RNA-Seq mirdeep2

updated 2.6 years ago by Ram 43k • written 10.0 years ago by Jordan ★ 1.3k

2

votes

5

replies

2.9k

views

solid read

updated 6.5 years ago by Biostar 20 • written 11.2 years ago by Jordan ★ 1.3k

61

votes

23

replies

57k

views

15 follow

bam mapping

updated 5 months ago by Lluís R. ★ 1.2k • written 11.2 years ago by Jordan ★ 1.3k

4

votes

3

replies

4.6k

views

tcga

updated 8.4 years ago by EagleEye 7.5k • written 10.3 years ago by Jordan ★ 1.3k

7

votes

7

replies

6.3k

views

mirna

updated 8.6 years ago by Biostar 20 • written 10.3 years ago by Jordan ★ 1.3k

1

vote

3

replies

4.6k

views

varscan2 variant-calling SNP somatic

updated 9.4 years ago by Ying W ★ 4.2k • written 9.4 years ago by Jordan ★ 1.3k

2

votes

1

reply

2.9k

views

duplicate-removal picard-tools SOLiD BAMs NGS

9.4 years ago by Jordan ★ 1.3k

9

votes

6

replies

8.3k

views

markduplicates samtools BAM sort picard

updated 2.6 years ago by Ram 43k • written 10.0 years ago by Jordan ★ 1.3k

2

votes

3

replies

3.2k

views

MuTect vcf variant-calling

updated 2.3 years ago by Ram 43k • written 9.6 years ago by Jordan ★ 1.3k

6

votes

5

replies

9.2k

views

ion-torrent variant-calling

updated 2.3 years ago by Ram 43k • written 9.7 years ago by Jordan ★ 1.3k

3

votes

7

replies

4.5k

views

somaticsniper vcf variant-calling depth

updated 2.5 years ago by Ram 43k • written 9.8 years ago by Jordan ★ 1.3k

3

votes

4

replies

6.7k

views

gene igv

updated 17 months ago by Ram 43k • written 9.8 years ago by Jordan ★ 1.3k

2

votes

3

replies

2.4k

views

tcga pipeline variant-calling

updated 2.6 years ago by Ram 43k • written 10.0 years ago by Jordan ★ 1.3k

8

votes

4

replies

4.8k

views

sequencing ngs transposable elements

updated 10.0 years ago by Casey Bergman 18k • written 10.6 years ago by Jordan ★ 1.3k

2

votes

8

replies

3.4k

views

mapping shrimp2 solid paired-end

updated 2.6 years ago by Ram 43k • written 10.1 years ago by Jordan ★ 1.3k

2

votes

11

replies

5.2k

views

10.2 years ago by Jordan ★ 1.3k

10

votes

8

replies

7.8k

views

7 follow

vcf variant

updated 10.3 years ago by swbarnes2 14k • written 10.6 years ago by Jordan ★ 1.3k

0

votes

3

replies

2.8k

views

sv

updated 2.3 years ago by Ram 43k • written 10.4 years ago by Jordan ★ 1.3k

2

votes

0

replies

3.3k

views

bam vcf variant-calling

updated 10.4 years ago by Biostar 20 • written 11.0 years ago by Jordan ★ 1.3k

6

votes

3

replies

6.0k

views

rna-seq tophat2 cuffdiff

updated 10.5 years ago by Devon Ryan 104k • written 10.5 years ago by Jordan ★ 1.3k

1

vote

4

replies

6.4k

views

cuffdiff tophat2 rna-seq

updated 10.5 years ago by Pierre Lindenbaum 161k • written 10.5 years ago by Jordan ★ 1.3k

0

votes

0

replies

3.4k

views

cnv output

10.6 years ago by Jordan ★ 1.3k

2

votes

3

replies

3.6k

views

cnv copynumber

updated 10.7 years ago by dankoboldt ▴ 140 • written 10.7 years ago by Jordan ★ 1.3k

1

vote

5

replies

4.2k

views

error mpileup

updated 10.7 years ago by dankoboldt ▴ 140 • written 11.0 years ago by Jordan ★ 1.3k

2

votes

2

replies

3.5k

views

samtools mpileup variant-calling vcf

updated 10.8 years ago by Pierre Lindenbaum 161k • written 10.8 years ago by Jordan ★ 1.3k

9

votes

3

replies

3.7k

views

dbsnp

updated 2.5 years ago by Ram 43k • written 10.8 years ago by Jordan ★ 1.3k

6

votes

4

replies

10k

views

macs peak-calling chip-seq

updated 16 months ago by Ram 43k • written 10.9 years ago by Jordan ★ 1.3k

4

votes

5

replies

6.2k

views

bed

updated 10.9 years ago by Ido Tamir 5.2k • written 10.9 years ago by Jordan ★ 1.3k

2

votes

4

replies

5.5k

views

coverage depth-of-coverage bedtools

updated 11.0 years ago by Jorge Amigo 14k • written 11.0 years ago by Jordan ★ 1.3k

8

votes

5

replies

5.6k

views

human-exome

updated 13 months ago by Ram 43k • written 11.0 years ago by Jordan ★ 1.3k

0

votes

4

replies

2.1k

views

chip-seq mapping

updated 11.0 years ago by Mikael Huss 4.8k • written 11.0 years ago by Jordan ★ 1.3k

12

votes

4

replies

11k

views

macs chip-seq

updated 11.0 years ago by KCC ★ 4.1k • written 11.0 years ago by Jordan ★ 1.3k

3

votes

5

replies

2.3k

views

bam samtools sort

updated 11.0 years ago by Ashutosh Pandey 12k • written 11.0 years ago by Jordan ★ 1.3k

0

votes

1

reply

3.3k

views

genome

updated 13 months ago by Ram 43k • written 11.0 years ago by Jordan ★ 1.3k

2

votes

4

replies

2.4k

views

tcga cancer

updated 11.0 years ago by Chris Miller 22k • written 11.0 years ago by Jordan ★ 1.3k

2

votes

4

replies

4.8k

views

cufflinks gtf gene rna-seq

updated 11.1 years ago by Alex Reynolds 35k • written 11.1 years ago by Jordan ★ 1.3k

2

votes

2

replies

2.9k

views

bam

updated 11.1 years ago by Ashutosh Pandey 12k • written 11.1 years ago by Jordan ★ 1.3k

0

votes

7

replies

2.4k

views

mapping trimming

updated 11.2 years ago by Ashutosh Pandey 12k • written 11.2 years ago by Jordan ★ 1.3k

0

votes

1

reply

1.8k

views

solid

updated 11.2 years ago by Ashutosh Pandey 12k • written 11.2 years ago by Jordan ★ 1.3k

0

votes

3

replies

2.1k

views

reference

11.2 years ago by Jordan ★ 1.3k

6

votes

10

replies

7.0k

views

fastq fastqc solid quality

updated 11.3 years ago by William ★ 5.3k • written 11.3 years ago by Jordan ★ 1.3k