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Ying W
Ying W
Reputation:
4,260
Joined:
16.0 years ago
Last seen:
5.9 years ago
Location:
South San Francisco, CA
Google Scholar:
c11r_KYAAAAJ

Bioinformatician working in biotech industry. Background is in computer science and genetics, did a PhD focusing to learn more about epigenetics and biostats. I've been working with sequencing data for quite a few years now, first on flies, then plants, and now with humans.

Latest posts by user
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Job: Computational Biology and Bioinformatics engineer positions @ Myriad in South San Francisco
snp sequencing
updated by Ram Ram • written by Ying W Ying W
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Answer: A: What is differences and similarites between NCI60, CCLE, CMAP?
written by Ying W Ying W
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Job: R&D Scientist, Computational Biology - Agilent Technologies, Santa Clara, CA
cloud big-data machine-learning
updated by Ram Ram • written by Ying W Ying W
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Comment: C: Batch correction for TCGA 450K data
written by Ying W Ying W
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Comment: C: RUVseq to correct for unwanted variance, interpreting p-value distribution
written by Ying W Ying W
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Answer: A: step by step mass spectrometry proteomics
written by Ying W Ying W
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Answer: A: Alternative for BGI WEGO
written by Ying W Ying W
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Comment: C: RUVseq to correct for unwanted variance, interpreting p-value distribution
written by Ying W Ying W
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Answer: A: pipeline of analyses to identify functional loops of chromosomes
written by Ying W Ying W
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Answer: A: ENCODE DNase Hypersensitivity narrowPeak scores
written by Ying W Ying W
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Answer: Answer: rsubread: featureCounts, extending ChIP-seq reads, counting the fragments
updated by Ram Ram • written by Ying W Ying W
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Answer: Answer: Is strand important when it comes to DNAse and ChIP-Seq peak calling?
updated by Ram Ram • written by Ying W Ying W
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Answer: A: How to get the total number of reads overlapping RNA regions in R
written by Ying W Ying W
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Comment: C: Do specialized Hi-C databases exist?
written by Ying W Ying W
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Comment: C: Annotating Chip Seq: How To Get Enrichment Over Random Background
written by Ying W Ying W
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Comment: Comment: TCGA: How to tell if the data is exome or WGS?
updated by Ram Ram • written by Ying W Ying W
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Answer: Answer: TCGA: How to tell if the data is exome or WGS?
updated by Ram Ram • written by Ying W Ying W
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Comment: Comment: Issues with DiffBind
updated by Ram Ram • written by Ying W Ying W
3 votes
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Answer: Answer: R: bisulfite squencing PCR plot
updated by Ram Ram • written by Ying W Ying W
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Comment: C: What criteria are used to determine supplementary alignment with bwa-mem (flag 2
written by Ying W Ying W
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