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Chris Miller
Chris Miller
Role:
Moderator
Reputation:
22,130
Joined:
16.4 years ago
Last seen:
3 months ago
Location:
Washington University in St. Louis, MO
Google Scholar:
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Twitter:
chrisamiller

I work in the Division of Oncology at Washington University in St. Louis, where I develop and apply computational tools to give us insight into the origins and progression of cancer.

Latest posts by user
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Comment: Comment: Modeling RNAseq batch effects using a non-case/control technical replicate
written by Chris Miller Chris Miller
3 votes
8 replies
3.0K views
Modeling RNAseq batch effects using a non-case/control technical replicate
batch-correction batch-effect rna-seq
updated by jared.andrews07 jared.andrews07 • written by Chris Miller Chris Miller
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Answer: Answer: SciClone R package
written by Chris Miller Chris Miller
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Comment: Comment: calling somatic variants w/o quality filters
written by Chris Miller Chris Miller
1 vote
1 reply
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Answer: Answer: TCGA - Is vital_status subject to follow_up duration?
written by Chris Miller Chris Miller
1 vote
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Answer: Answer: Pindel - comparing tumour vs somatic sample
written by Chris Miller Chris Miller
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Comment: Comment: sciclone iteration does not converge
written by Chris Miller Chris Miller
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1 reply
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Answer: Answer: sciclone iteration does not converge
written by Chris Miller Chris Miller
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Comment: Comment: sciClone input vaf file?
written by Chris Miller Chris Miller
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Comment: C: Effects of applying BQSR twice?
written by Chris Miller Chris Miller
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2 replies
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Effects of applying BQSR twice?
bqsr alignment qualityscores sequencing
updated by h.mon h.mon • written by Chris Miller Chris Miller
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Comment: C: How to distinguish subclone from sciClone or PyClone result
written by Chris Miller Chris Miller
1 vote
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Answer: A: How to distinguish subclone from sciClone or PyClone result
written by Chris Miller Chris Miller
1 vote
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Answer: A: Sciclone cluster all around y=x
written by Chris Miller Chris Miller
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1 reply
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Is read trimming needed for WGBS (bisulfite) data?
wgbs bisufite trimming alignment
updated by Devon Ryan Devon Ryan • written by Chris Miller Chris Miller
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Answer: A: Removing white space from the beginning of the second field (sequence) in a fast
written by Chris Miller Chris Miller
2 votes
1 reply
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Answer: A: Using Varscan without a matched normal
written by Chris Miller Chris Miller
3 votes
0 replies
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Answer: A: How can I get this sorted by ascending order? (when the number and character is
written by Chris Miller Chris Miller
2 votes
1 reply
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Comment: C: How Can I Know The Length Of Mapped Reads From Bam File?
written by Chris Miller Chris Miller
5 votes
0 replies
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Answer: A: Tool to separate human and mouse rna seq reads
written by Chris Miller Chris Miller
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