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Jordan
Jordan
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Last seen:
4.7 years ago
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Pittsburgh
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Latest posts by user
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Comment: Comment: How do we handle TPM values after converting from Ensembl to HUGO genes?
written by Jordan Jordan
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4 replies
2.4K views
How do we handle TPM values after converting from Ensembl to HUGO genes?
ensembl hugo tpm-calculator tpm rna-seq
updated by Istvan Albert Istvan Albert • written by Jordan Jordan
0 votes
2 replies
2.8K views
Error while running vcf2maf tool
vep vcf2maf variant-calling vcfs maf
written by Jordan Jordan
1 vote
1 reply
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Comment: C: How do you know the best segments in cnvkit after filtering?
written by Jordan Jordan
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3 replies
2.6K views
How do you know the best segments in cnvkit after filtering?
cnvkit wgs cnv
updated by brunobsouzaa brunobsouzaa • written by Jordan Jordan
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1 reply
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Comment: C: The center in scatter plot generated by CNVkit looks off
written by Jordan Jordan
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1 reply
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Comment: C: The center in scatter plot generated by CNVkit looks off
written by Jordan Jordan
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0 replies
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Comment: C: How are the log2 values in CNVkit .cnr files calculated?
written by Jordan Jordan
2 votes
4 replies
4.3K views
How are the log2 values in CNVkit .cnr files calculated?
cnvkit .cnr wgs cnv
updated by Kevin Blighe Kevin Blighe • written by Jordan Jordan
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6 replies
2.5K views
The center in scatter plot generated by CNVkit looks off
cnvkit wgs scatter-plot
updated by d-cameron d-cameron • written by Jordan Jordan
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1 reply
2.0K views
Creating a panel of normal from one normal sample
mutect2 panelofnormals variant-calling gatk
updated by Kevin Blighe Kevin Blighe • written by Jordan Jordan
0 votes
1 reply
603 views
Time take for protein protein interaction validation methods
proteins interactome y2h assays
written by Jordan Jordan
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0 replies
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Comment: C: Tools for asserting matching pairs of samples from the same patient
written by Jordan Jordan
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3 replies
2.0K views
Tools for asserting matching pairs of samples from the same patient
rna-seq ngs
updated by dariober dariober • written by Jordan Jordan
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1 reply
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Comment: Comment: Add read group to header after samtools merge
updated by Ram Ram • written by Jordan Jordan
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0 replies
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Answer: Answer: How to count novel and known splice junction reads from BAM
updated by Ram Ram • written by Jordan Jordan
2 votes
0 replies
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Answer: A: using cufflinks when investigating differential expression
written by Jordan Jordan
1 vote
0 replies
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Comment: Comment: TCGA normalized count data of 1000 samples for DGE
updated by Ram Ram • written by Jordan Jordan
1 vote
1 reply
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Answer: Answer: Cufflinks 0.0.7 and CummeRbound
updated by Ram Ram • written by Jordan Jordan
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1 reply
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Comment: C: NOT RESETTING NORMAL error using Varscan2
written by Jordan Jordan
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