6
votes
4
replies
331
views
0
votes
5
replies
326
views
6 days ago by
SilhouetteQ
•
0
3
votes
1
reply
325
views
1
vote
4
replies
320
views
3
votes
4
replies
319
views
0
votes
4
replies
318
views
0
votes
6
replies
316
views
0
votes
4
replies
313
views
updated 1 day ago by
txema.heredia
▴
130
•
written 2 days ago by
Ngrin
•
0
0
votes
4
replies
312
views
2 days ago by
kilcdincer
▴
10
0
votes
2
replies
311
views
updated 6 days ago by
Zhenyu Zhang
★
1.2k
•
written 16 days ago by
yahn
•
0
2
votes
4
replies
307
views
4 days ago by
Esraa
•
0
1
vote
5
replies
307
views
updated 2 days ago by
Ram
43k
•
written 3 days ago by
manuelmourato25
•
0
0
votes
5
replies
302
views
0
votes
2
replies
299
views
updated 17 hours ago by
anton.i.petrov
•
0
•
written 3 months ago by
Larissa
•
0
1
vote
4
replies
296
views
3
votes
3
replies
293
views
1
vote
4
replies
293
views
1
vote
3
replies
291
views
updated 4 days ago by
jared.andrews07
★
16k
•
written 4 days ago by
jen
▴
10
2
votes
3
replies
291
views
0
votes
5
replies
288
views
3
votes
2
replies
287
views
5 days ago by
analyst
▴
50
2
votes
3
replies
283
views
4 days ago by
ramiro.barrantes
•
0
0
votes
4
replies
282
views
1 day ago by
mavy
▴
10
2
votes
5
replies
280
views
updated 5 days ago by
Philipp Bayer
8.5k
•
written 5 days ago by
林明德
•
0
1
vote
3
replies
279
views
1
vote
3
replies
279
views
0
votes
3
replies
279
views
updated 2 days ago by
Pierre Lindenbaum
161k
•
written 3 days ago by
saifulislam99121
•
0
1
vote
1
reply
276
views
2
votes
4
replies
273
views
updated 3 days ago by
yura.grabovska
▴
90
•
written 3 days ago by
ev97
▴
20
1
vote
2
replies
269
views
5 days ago by
Lukas
•
0
1
vote
5
replies
269
views
3 days ago by
kl
▴
10
0
votes
3
replies
268
views
0
votes
4
replies
263
views
2
votes
3
replies
253
views
2
votes
2
replies
251
views
updated 2 days ago by
Ram
43k
•
written 2 days ago by
txema.heredia
▴
130
1
vote
1
reply
249
views
3 days ago by
ramiro.barrantes
•
0
0
votes
1
reply
247
views
0
votes
4
replies
244
views
3 days ago by
LucisTheFather
•
0
0
votes
1
reply
244
views
updated 6 days ago by
Zhenyu Zhang
★
1.2k
•
written 9 days ago by
jain72744
▴
10
3
votes
3
replies
238
views
0
votes
2
replies
235
views
1
vote
2
replies
234
views
0
votes
2
replies
233
views
updated 6 days ago by
Zhenyu Zhang
★
1.2k
•
written 10 days ago by
elisheva
▴
120
3
votes
3
replies
232
views
2
votes
4
replies
231
views
1
vote
2
replies
231
views
0
votes
2
replies
229
views
1
vote
5
replies
223
views
updated 4 days ago by
Pierre Lindenbaum
161k
•
written 4 days ago by
biology_inform
▴
50
0
votes
2
replies
220
views
updated 2 days ago by
Pierre Lindenbaum
161k
•
written 2 days ago by
melissachua90
▴
70
Recent Votes
Recent Locations •
All
India, 7 minutes ago
Turkey, 8 minutes ago
Germany, 8 minutes ago
Iran, 10 minutes ago
Bologna, 12 minutes ago
United States, 12 minutes ago
Germany, 15 minutes ago
Recent Awards •
All
Popular Question to
carlopecoraro2
★
2.5k
Popular Question to
scideas
▴
30
Popular Question to
Muhammad
•
0
Popular Question to
synat.keam
▴
100
Popular Question to
syedahamdani94
•
0
Popular Question to
mohammadhassanj
▴
260
Recent Replies
Comment: What marks a De-Novo Genome assembly as FAILED?
by
Umer
▴
50
Yes. We are sequencing 45 different samples with illumina.
12 of these are also going to be sequenced with Nanopore (for hybrid assembly). …
Comment: HGVS Nomenclature of Multiple Indels found in Cis
by
LauferVA
4.2k
how has this code progressed? is it publically available? would you want to work together?
Comment: Design for complex RNA-Seq experiment using Deseq2
by
Ezequiel
•
0
I completely agree with most points. The PCA shows that the biggest driver of difference is the patients themselves, with PRE and POST time…
Comment: Add stats to the plot
by
marco.barr
▴
130
Hi, you can add statistical annotations using `ggpubr` function `stat_pvalue_manual `. You need to make sure you calculate the p-values fir…
Answer: seqtk subseq in.fastq list.txt > out.fastq not extracting full sequence from
by
ATpoint
82k
Use everything before the whitespace in list.txt, for example `A00869:294:HCW57DSXY:2:1101:3929:1000` and not `A00869:294:HCW57DSXY:2:1101:…
Answer: CellRanger output more cells than specified using --force-cells? Why?
by
scideas
▴
30
I actually had this same issue with CellRanger v7- turns out that since you have 2 species in your mapping reference, CellRanger is forcing…
Answer: Checking chromosome builds for genotyping data
by
Muhammad
•
0
Assume you have genotype data in Plink format. (G.bed, G.bim, G.fam)
Download some reference panel data in Plink format (R.bed, R.bim, R.f…
Comment: Error in CIBERSORTx ($ operator is invalid for atomic vectors)
by
nguyenn6
•
0
did you ever figure it out? i'm having the same issue.
Comment: Traveler with Infernal mapping failed
by
anton.i.petrov
•
0
Hi Larissa! I am the lead developer of R2DT and I've just noticed this question. Could you please email help@r2dt.bio with your input seque…
Comment: constructing pangenome through psvcp
by
analyst
▴
50
Fixed the issue by updating nucmer version.
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
GenoMax
142k
Can you create a small test database (`makeblastdb`) from your query file and try to run the search against the same file and see if that w…
Comment: calculating genomic coverage/ base overlap in R
by
1769mkc
★
1.2k
you can `dput(head(df)` for the both the data frame so that other can test for possible solutions
Comment: Help with Biopython for Beginner
by
Joe
21k
One question before offering more solutions: are you trying to learn Python with this as an example problem, or are you trying to find the …
Answer: RNAseq coverage vs depth for transcript isoform expression?
by
Gordon Smyth
★
7.2k
See the exploration of isoform estimation precision vs read length and sequencing depth in our paper: https://doi.org/10.1093/nar/gkad1167.…
Traffic: 1732 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6