11
votes
31
replies
15k
views
6 follow
120
votes
31
replies
200k
views
17 follow
updated 6 months ago by
Ram
44k
•
written 14.1 years ago by
Eric Normandeau
11k
147
votes
31
replies
138k
views
26 follow
updated 10 months ago by
Ram
44k
•
written 12.3 years ago by
Anima Mundi
★
2.9k
50
votes
30
replies
12k
views
13 follow
updated 8 weeks ago by
Istvan Albert
100k
•
written 8.2 years ago by
Ram
44k
31
votes
30
replies
15k
views
6 follow
updated 11 months ago by
Ram
44k
•
written 6.0 years ago by
Jennifer Pham
▴
450
18
votes
30
replies
10k
views
6 follow
updated 11 months ago by
Ram
44k
•
written 7.4 years ago by
Brian Bushnell
20k
58
votes
30
replies
11k
views
13 follow
updated 6 months ago by
Ram
44k
•
written 14.1 years ago by
Khader Shameer
18k
102
votes
30
replies
62k
views
25 follow
updated 7 months ago by
Ram
44k
•
written 14.2 years ago by
Biostar User
★
1.0k
4
votes
29
replies
11k
views
6 follow
124
votes
29
replies
7.4k
views
18 follow
updated 6 months ago by
Ram
44k
•
written 14.2 years ago by
Simon Cockell
7.4k
16
votes
29
replies
1.9k
views
updated 3 months ago by
Mensur Dlakic
★
27k
•
written 3 months ago by
anasjamshed
▴
120
84
votes
29
replies
32k
views
20 follow
updated 10 months ago by
amziepickles
•
0
•
written 8.2 years ago by
Obi Griffith
20k
20
votes
29
replies
2.6k
views
6 follow
updated 7 months ago by
Pierre Lindenbaum
162k
•
written 7 months ago by
Axzd
▴
70
70
votes
29
replies
15k
views
13 follow
updated 10 weeks ago by
jkbonfield
★
1.2k
•
written 5.2 years ago by
finswimmer
16k
39
votes
28
replies
11k
views
10 follow
3 months ago by
Jeremy Leipzig
22k
43
votes
28
replies
5.7k
views
13 follow
updated 6 months ago by
Ram
44k
•
written 14.1 years ago by
Eric Normandeau
11k
29
votes
28
replies
35k
views
11 follow
updated 21 days ago by
thomas.heigl.ibk
•
0
•
written 12.8 years ago by
Bioscientist
★
1.7k
197
votes
27
replies
35k
views
20 follow
Forum:
Bioinformatics Cartoon
updated 10 months ago by
Ram
44k
•
written 12.4 years ago by
Maxime Lamontagne
★
2.3k
73
votes
27
replies
28k
views
16 follow
updated 5 months ago by
snardeli
•
0
•
written 10.3 years ago by
Istvan Albert
100k
26
votes
27
replies
2.2k
views
10 follow
82
votes
27
replies
21k
views
12 follow
27
votes
27
replies
10k
views
6 follow
28
votes
27
replies
15k
views
9 follow
77
votes
26
replies
121k
views
15 follow
81
votes
26
replies
13k
views
17 follow
24
votes
26
replies
3.7k
views
updated 11 months ago by
Ram
44k
•
written 4.6 years ago by
German.M.Demidov
★
2.9k
20
votes
26
replies
3.3k
views
updated 9 months ago by
Joe
21k
•
written 4.9 years ago by
Joel Wallenius
▴
210
96
votes
26
replies
31k
views
15 follow
updated 6 months ago by
Ram
44k
•
written 14.1 years ago by
Pierre Lindenbaum
162k
3
votes
26
replies
2.1k
views
6 follow
47
votes
26
replies
4.2k
views
11 follow
Blog:
Evolution of Biostars
updated 9 months ago by
aldhairmedico
▴
70
•
written 5.2 years ago by
venu
7.1k
38
votes
26
replies
19k
views
16 follow
written 8.3 years ago by
biostart
▴
370
105
votes
26
replies
43k
views
23 follow
updated 8 months ago by
zx8754
11k
•
written 11.4 years ago by
henryvuong
▴
810
21
votes
26
replies
9.8k
views
11 follow
Tutorial:
Create de novo repeat library
7
votes
25
replies
11k
views
6 follow
updated 11 months ago by
Ram
44k
•
written 10.1 years ago by
mikhail.shugay
3.5k
69
votes
25
replies
7.1k
views
16 follow
updated 6 months ago by
Ram
44k
•
written 14.2 years ago by
Dave Gerrard
▴
190
51
votes
25
replies
6.9k
views
10 follow
13
votes
25
replies
11k
views
9 follow
updated 11 months ago by
Ram
44k
•
written 10.8 years ago by
mikhail.shugay
3.5k
6
votes
25
replies
39k
views
14 follow
updated 11 months ago by
13554221497
•
0
•
written 6.2 years ago by
ARich
▴
130
38
votes
25
replies
9.2k
views
13 follow
updated 8 months ago by
Ram
44k
•
written 8.1 years ago by
waqasnayab
▴
250
36
votes
25
replies
33k
views
15 follow
68
votes
25
replies
16k
views
12 follow
updated 7 months ago by
GenoMax
142k
•
written 5.2 years ago by
Phil Ewels
★
1.4k
18
votes
25
replies
15k
views
13 follow
updated 10 months ago by
Pierre Lindenbaum
162k
•
written 2.3 years ago by
ConvolutedGenome
▴
30
13
votes
25
replies
4.4k
views
7 follow
17
votes
25
replies
2.5k
views
60
votes
25
replies
5.9k
views
8 follow
updated 11 months ago by
Ram
44k
•
written 3.8 years ago by
telroyjatter
▴
230
60
votes
25
replies
22k
views
17 follow
updated 7 months ago by
Ram
44k
•
written 14.3 years ago by
Giovanni M Dall'Olio
28k
64
votes
24
replies
3.1k
views
12 follow
updated 12 months ago by
Ram
44k
•
written 5.6 years ago by
Molecular_genetics
▴
80
87
votes
24
replies
24k
views
17 follow
Tutorial:
Gene Set Enrichment Analysis
updated 5 weeks ago by
Gordon
•
0
•
written 3.6 years ago by
Hamid Ghaedi
3.2k
80
votes
24
replies
11k
views
18 follow
updated 6 months ago by
Ram
44k
•
written 14.1 years ago by
Giovanni M Dall'Olio
28k
27
votes
24
replies
2.5k
views
7 follow
updated 12 months ago by
Ram
44k
•
written 5.6 years ago by
Chris Miller
22k
Recent Votes
Recent Locations •
All
Turkey, 5 minutes ago
Germany, 10 minutes ago
United States, 14 minutes ago
United States, 17 minutes ago
Moscow, 18 minutes ago
Germany, 18 minutes ago
Italy, 20 minutes ago
Recent Awards •
All
Popular Question to
Erika
•
0
Popular Question to
bioinfo
▴
150
Popular Question to
a.bibek52
▴
10
Popular Question to
adarsh_pp
▴
40
Recent Replies
Comment: What is a good way to do gene differentials in single cell data where one group
by
ATpoint
82k
Preferred if you have true biological replicates. Can still be combined with my subsetting strategy, like use 100x different cells for the …
Answer: ComplexHeatmap - How to change fontsize of rowAnnotation
by
ATpoint
82k
```r
set.seed(1)
m = matrix(rnorm(100), nrow = 10)
rownames(m) = 1:10
# normal
ha = rowAnnotation(foo = anno_mark(at=1:nrow(m), labels=row…
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
Ram
44k
Please do not add answers unless you're actually answering the question. I've moved your post to a comment.
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
hannes.bongartz
•
0
I still cannot find a way. It seems to be an easy to solve issue and I was trying any possible combination with the aforementioned gp=gpar(…
Comment: What is a good way to do gene differentials in single cell data where one group
by
fracarb8
★
1.6k
I would probably use a pseudobulk approach.
Comment: Error when looping over multiple columns in a data frame in R
by
Jeremy
▴
910
`cutpoint_results[[col_name]]` adds each new cut point to the list entitled "cutpoint_results", while keeping the original column names fr…
Answer: PCA plot no distinct cluster. Only p < 0.05 indicates significant DEGs, while ad
by
swbarnes2
14k
Never use uncorrected p-values with RNASeq.
Your PCA is suggesting that your sample groups are not very different, and the DEG tests con…
Comment: What is a good way to do gene differentials in single cell data where one group
by
ATpoint
82k
I would keep it transparent. Do DE by subsetting large to small group. Do that randomly many times, then either average stats or use some s…
Answer: Trying to understand warning from MACS2 about too few paired peaks and differing
by
jared.andrews07
★
17k
Without looking at the actual sequence for each genome, my guess is that the Echinobase reference just matches much more closely to the org…
Comment: What do the transcript variant # mean in RefSeq?
by
Ram
44k
> It does not seem to be the longest transcript. Is it the canonical transcript?
Longest == canonical. If you're looking for the transcrip…
Comment: Mouse or Rat Gene Expression Data Similar to GTEx
by
Shicheng Guo
★
9.4k
Hi ATpoint, Thank you for your responses. My apologies if my inquiries have seemed one-sided. I greatly value the collaborative spirit of t…
Comment: Mouse or Rat Gene Expression Data Similar to GTEx
by
ATpoint
82k
Team? A team helps each other out. You only take help by posting your regular lazy do-my-work questions and never give anything back. Save …
Comment: What do the transcript variant # mean in RefSeq?
by
GenoMax
142k
> What do these correspond to? It does not seem to be the longest transcript. Is it the canonical transcript?
Those are just different tra…
Answer: Mouse or Rat Gene Expression Data Similar to GTEx
by
jared.andrews07
★
17k
MGI has a [Gene Expression Database](https://www.informatics.jax.org/expression.shtml) that'll largely get you what you want.
Comment: Difference in Bismark output methylation call files and coverage files
by
Papyrus
★
2.9k
Your files end in `CpG_report` so they are the "genome-wide cytosine report output". If you look at the [Bismark documentation][1] you will…
Traffic: 1642 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6