User: cocchi.e89

2

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6

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1.8k

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vcf ad filter

updated 6 months ago by Jingjingzhang • 0 • written 4.0 years ago by cocchi.e89 ▴ 270

1

vote

12

replies

3.7k

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gatk mutect2 tumor human wgs

updated 14 months ago by m. bioinfo • 0 • written 3.7 years ago by cocchi.e89 ▴ 270

4

votes

8

replies

1.6k

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human low-quality-site BED hg38

18 months ago by cocchi.e89 ▴ 270

3

votes

1

reply

832

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gene loss-of-function pli

updated 21 months ago by LChart 3.9k • written 22 months ago by cocchi.e89 ▴ 270

0

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0

replies

373

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GATK chromosome CNV loss mosaic

22 months ago by cocchi.e89 ▴ 270

0

votes

1

reply

561

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somatic germline haplotypecaller mutect2

updated 2.2 years ago by Shred ★ 1.4k • written 2.2 years ago by cocchi.e89 ▴ 270

0

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2

replies

1.3k

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gnomAD human hg19

updated 2.3 years ago by Kalin ▴ 50 • written 3.2 years ago by cocchi.e89 ▴ 270

0

votes

1

reply

563

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genome human variants distribution

updated 2.4 years ago by liorglic ★ 1.4k • written 2.4 years ago by cocchi.e89 ▴ 270

3

votes

2

replies

1.2k

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VEP repeated-region variant human

updated 2.4 years ago by Vivek Todur ▴ 60 • written 3.5 years ago by cocchi.e89 ▴ 270

0

votes

0

replies

459

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pathogenicity missense in-silico

2.6 years ago by cocchi.e89 ▴ 270

1

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1

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1.1k

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Mutect2 GenomicsDBImport somatic VCF GATK

updated 10 months ago by sure ▴ 100 • written 2.8 years ago by cocchi.e89 ▴ 270

0

votes

0

replies

482

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variant WGS SNP INDEL

3.0 years ago by cocchi.e89 ▴ 270

2

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3

replies

1.3k

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SelectVariants SNP gatk INDEL

updated 3.0 years ago by Pierre Lindenbaum 161k • written 3.0 years ago by cocchi.e89 ▴ 270

4

votes

9

replies

6.0k

views

gatk mutect2 panel-of-normal wes non-tumor

updated 3.1 years ago by DIG • 0 • written 3.9 years ago by cocchi.e89 ▴ 270

0

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0

replies

1.1k

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CNV germline somatic GATK WGS

3.2 years ago by cocchi.e89 ▴ 270

1

vote

1

reply

694

views

CWL input secondaryFiles

updated 2.8 years ago by Michael R. Crusoe ★ 1.9k • written 3.2 years ago by cocchi.e89 ▴ 270

1

vote

1

reply

720

views

CWL scatter workflow nested_crossproduct

updated 2.8 years ago by Michael R. Crusoe ★ 1.9k • written 3.2 years ago by cocchi.e89 ▴ 270

0

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3

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832

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twin ped pedigree GATK

3.4 years ago by cocchi.e89 ▴ 270

0

votes

1

reply

968

views

gatk cwl GenotypeGVCFs

updated 2.8 years ago by Michael R. Crusoe ★ 1.9k • written 3.4 years ago by cocchi.e89 ▴ 270

1

vote

3

replies

1.2k

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covid clinical data

updated 3.5 years ago by h.mon 35k • written 4.2 years ago by cocchi.e89 ▴ 270

0

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0

replies

1.4k

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gatk cnv somatic

3.6 years ago by cocchi.e89 ▴ 270

0

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1

reply

1.6k

views

VEP hg38 gnomAD annotation

updated 3.6 years ago by Biostar 20 • written 3.6 years ago by cocchi.e89 ▴ 270

0

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2

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2.0k

views

gatk mutect2 panel-of-normal hg38 hg19

updated 3.6 years ago by L_LANKA • 0 • written 4.0 years ago by cocchi.e89 ▴ 270

1

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1

reply

901

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cnv vcf gatk genes

3.7 years ago by cocchi.e89 ▴ 270

1

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1

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1.2k

views

gatk cnv vcf seg cns

updated 3.7 years ago by newbio17 ▴ 360 • written 3.7 years ago by cocchi.e89 ▴ 270

11

votes

13

replies

10k

views

7 follow

wgs coding bed

updated 6 months ago by Ram 43k • written 3.7 years ago by cocchi.e89 ▴ 270

1

vote

2

replies

1.0k

views

wgs human gatk differences variants

updated 3.7 years ago by harold.smith.tarheel ★ 4.9k • written 3.7 years ago by cocchi.e89 ▴ 270

0

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1

reply

1.6k

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gatk cnv germline plot vcf

3.7 years ago by cocchi.e89 ▴ 270

1

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2

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1.2k

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gatk cnv germline

3.7 years ago by cocchi.e89 ▴ 270

2

votes

1

reply

928

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cwl array gatk

3.7 years ago by cocchi.e89 ▴ 270

1

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0

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1.6k

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gatk mutect2 somatic

3.8 years ago by cocchi.e89 ▴ 270

1

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2

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1.7k

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gatk PoN Panel-of-Normals CNV SV

3.8 years ago by cocchi.e89 ▴ 270

3

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1

reply

1.0k

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gnomad sv talkowski-lab pipeline

3.9 years ago by cocchi.e89 ▴ 270

0

votes

2

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1.0k

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mutect2 gatk somatic chromosome-X hemizygosis

3.9 years ago by cocchi.e89 ▴ 270

0

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0

replies

1.2k

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gatk mutect2 bed mutation

4.0 years ago by cocchi.e89 ▴ 270

1

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1

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1.6k

views

vep ensembl gnomad AF dbNSFP

updated 4.0 years ago by Ben_Ensembl ★ 2.4k • written 4.0 years ago by cocchi.e89 ▴ 270

2

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4

replies

1.9k

views

mosdepth coverage exome WES

updated 4.0 years ago by Biostar 20 • written 4.0 years ago by cocchi.e89 ▴ 270

3

votes

1

reply

1.6k

views

vep grch37 fasta ensembl

updated 4.0 years ago by Ben_Ensembl ★ 2.4k • written 4.0 years ago by cocchi.e89 ▴ 270

2

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4

replies

1.1k

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mutation hotspot wes wgs

updated 4.0 years ago by igor 13k • written 4.0 years ago by cocchi.e89 ▴ 270

1

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2

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2.9k

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bcftools pipe vcf

updated 2.4 years ago by e0223230 • 0 • written 4.0 years ago by cocchi.e89 ▴ 270

1

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1

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1.4k

views

exon coordinates variant human exome

updated 4.0 years ago by rbagnall ★ 1.8k • written 4.0 years ago by cocchi.e89 ▴ 270

0

votes

5

replies

1.1k

views

vep MutationAssessor variant human

updated 4.1 years ago by Ben_Ensembl ★ 2.4k • written 4.1 years ago by cocchi.e89 ▴ 270

5

votes

6

replies

1.0k

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phyre2 protein model mutation

updated 4.2 years ago by Mensur Dlakic ★ 27k • written 4.2 years ago by cocchi.e89 ▴ 270

0

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2

replies

1.2k

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sequence protein visualization frameshift mutation

updated 4.2 years ago by KevinL ▴ 60 • written 4.2 years ago by cocchi.e89 ▴ 270

0

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1

reply

1.1k

views

vcf variants exome hgvs

updated 4.3 years ago by GokalpC ▴ 100 • written 4.3 years ago by cocchi.e89 ▴ 270

1

vote

4

replies

3.9k

views

intervar varsome acmg guidelines

updated 4.8 years ago by manuel.belmadani ★ 1.3k • written 5.0 years ago by cocchi.e89 ▴ 270

2

votes

3

replies

923

views

codon database domain vep

updated 4.8 years ago by GenoMax 142k • written 4.8 years ago by cocchi.e89 ▴ 270

1

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4

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2.2k

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vep domains protein human variation

4.8 years ago by cocchi.e89 ▴ 270

1

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3

replies

1.1k

views

uniprot variant vep ensembl

updated 4.9 years ago by Elisabeth Gasteiger ★ 2.4k • written 4.9 years ago by cocchi.e89 ▴ 270

3

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4

replies

1.6k

views

deletion variant exome indel acmg

updated 4.9 years ago by Jean-Karim Heriche 27k • written 4.9 years ago by cocchi.e89 ▴ 270