User: Assa Yeroslaviz

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Seurat Violin-Plot ggplot2 patchwork

1 day ago by Assa Yeroslaviz ★ 1.8k

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5

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203

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single-cell whitelist UMI RNA UMI-Tools

updated 2 days ago by i.sudbery 19k • written 2 days ago by Assa Yeroslaviz ★ 1.8k

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3

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163

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java bbduk bbmap fastq

updated 2 days ago by GenoMax 142k • written 2 days ago by Assa Yeroslaviz ★ 1.8k

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3

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433

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Seurat RenameIdents R

9 days ago by Assa Yeroslaviz ★ 1.8k

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9

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582

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index-hopping NovoSeq illumina NGS Seqeucning

4 weeks ago by Assa Yeroslaviz ★ 1.8k

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258

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r pathway go-enrichment gage

5 weeks ago by Assa Yeroslaviz ★ 1.8k

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2

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300

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annotation FindAllMarkers Seurat cell-type

updated 10 weeks ago by Ram 43k • written 10 weeks ago by Assa Yeroslaviz ★ 1.8k

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144

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chip-seq correlations proteomics

3 months ago by Assa Yeroslaviz ★ 1.8k

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201

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chip-seq peaks homer makeTagDirectory

3 months ago by Assa Yeroslaviz ★ 1.8k

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4

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582

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R fasta codon-table

3 months ago by Assa Yeroslaviz ★ 1.8k

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163

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cross-correlation peak chip-seq phantompeak ChIPseeker

3 months ago by Assa Yeroslaviz ★ 1.8k

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1

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295

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GenomicFeatures chipseq chipseeker annoDB TxDb

updated 3 months ago by rpolicastro 13k • written 3 months ago by Assa Yeroslaviz ★ 1.8k

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8

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1.5k

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citeseq-count cellranger cite-seq scRNA-seq

updated 4 months ago by ATpoint 82k • written 9 months ago by Assa Yeroslaviz ★ 1.8k

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253

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mapping uniprot R kegg clusterprofiler

5 months ago by Assa Yeroslaviz ★ 1.8k

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4

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605

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GO-enrichment gene-expression R ggplot RNA-seq

7 months ago by Assa Yeroslaviz ★ 1.8k

3

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6

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879

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tidyverse r offtopic

updated 7 months ago by Ram 43k • written 8 months ago by Assa Yeroslaviz ★ 1.8k

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3

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trajectory rna-seq tidyverse r velocity

updated 8 months ago by jared.andrews07 ★ 16k • written 8 months ago by Assa Yeroslaviz ★ 1.8k

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4

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602

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workflow UniProt proteomics WGS RNA-Seq

updated 9 months ago by biofalconch ★ 1.1k • written 9 months ago by Assa Yeroslaviz ★ 1.8k

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2

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410

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glm RNA-Seq time-series

10 months ago by Assa Yeroslaviz ★ 1.8k

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5

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879

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SingleR celldex cell-type-annotations scRNA

updated 10 months ago by Nitin Narwade ★ 1.6k • written 10 months ago by Assa Yeroslaviz ★ 1.8k

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2

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909

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6 follow

singleCellExperiment scDblFinder SMART-Seq

updated 5 months ago by e.r.zakiev ▴ 210 • written 10 months ago by Assa Yeroslaviz ★ 1.8k

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1

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1.2k

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Seurat single-cell FindVariableFeatures FindAllMarkers RNA-Seq

updated 11 months ago by rpolicastro 13k • written 11 months ago by Assa Yeroslaviz ★ 1.8k

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2

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651

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normalization ERCC size.factors DESeq2

updated 12 months ago by ATpoint 82k • written 12 months ago by Assa Yeroslaviz ★ 1.8k

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5

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2.3k

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full-rank model-matrix deseq2

updated 12 months ago by GenoMax 142k • written 2.9 years ago by Assa Yeroslaviz ★ 1.8k

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1

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475

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single-cell-experiment plotColData scater

12 months ago by Assa Yeroslaviz ★ 1.8k

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390

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bamCoverage deepTools

updated 10 months ago by Ram 43k • written 13 months ago by Assa Yeroslaviz ★ 1.8k

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17

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3.2k

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single-cell smart-seq

updated 14 months ago by dsull ★ 6.0k • written 14 months ago by Assa Yeroslaviz ★ 1.8k

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412

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normalization bamCompare deepTools

updated 10 months ago by Ram 43k • written 14 months ago by Assa Yeroslaviz ★ 1.8k

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4

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2.6k

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ribo-seq star

updated 15 months ago by i.sudbery 19k • written 15 months ago by Assa Yeroslaviz ★ 1.8k

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3

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935

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sequencing p-site riboseq offset

updated 17 months ago by Jack Tierney ▴ 360 • written 17 months ago by Assa Yeroslaviz ★ 1.8k

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4

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1.3k

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mageck mageckFlute squareView scatterplot

17 months ago by Assa Yeroslaviz ★ 1.8k

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5

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830

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Run-Selector GEO gene-expression-omnibus

updated 18 months ago by GenoMax 142k • written 18 months ago by Assa Yeroslaviz ★ 1.8k

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2

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594

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group_by tibble tidyverse

updated 18 months ago by dariober 14k • written 18 months ago by Assa Yeroslaviz ★ 1.8k

3

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2

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559

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tidyyverse dplyr R data.frame

19 months ago by Assa Yeroslaviz ★ 1.8k

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3

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624

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transcription-factor-binding-site gene-regulation transcription-factor

20 months ago by Assa Yeroslaviz ★ 1.8k

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2

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706

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pycoQC long-read-seq nanopore fastqc

24 months ago by Assa Yeroslaviz ★ 1.8k

8

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7

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2.8k

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long-read-seq nanopore fastqc

updated 2.0 years ago by Istvan Albert 100k • written 2.0 years ago by Assa Yeroslaviz ★ 1.8k

15

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11

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8.8k

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6 follow

pattern fasta awk sed regexp

updated 24 months ago by cpad0112 21k • written 9.2 years ago by Assa Yeroslaviz ★ 1.8k

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347

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plink GWAS pQTL linkage-disequilibrium

2.2 years ago by Assa Yeroslaviz ★ 1.8k

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0

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418

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dexseq normalization counts

2.2 years ago by Assa Yeroslaviz ★ 1.8k

3

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1

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505

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TADs interactions contact-maps AB-compartments HiC

updated 2.3 years ago by ATpoint 82k • written 2.3 years ago by Assa Yeroslaviz ★ 1.8k

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1

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780

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differential-splicing edger diffSpliceDGE

updated 2.3 years ago by Vitor1 ▴ 120 • written 2.3 years ago by Assa Yeroslaviz ★ 1.8k

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5

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5.1k

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samtools reads bam compare

updated 2.6 years ago by Pierre Lindenbaum 161k • written 2.6 years ago by Assa Yeroslaviz ★ 1.8k

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477

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ribosomal-profiling ribo-seq peaks

3.0 years ago by Assa Yeroslaviz ★ 1.8k

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0

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846

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rasterGrob PNG Rmarkdown layout

3.1 years ago by Assa Yeroslaviz ★ 1.8k

2

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1

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773

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WGS mapping SNP CNV

updated 3.1 years ago by Boberoni ▴ 10 • written 3.1 years ago by Assa Yeroslaviz ★ 1.8k

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2

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817

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transgene insertion gtf annotation

3.2 years ago by Assa Yeroslaviz ★ 1.8k

1

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2

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1.3k

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riboseq ribosome profiling ribo-seq

updated 3.3 years ago by taufiqbge • 0 • written 5.1 years ago by Assa Yeroslaviz ★ 1.8k

1

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0

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743

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mtRNA normalization rna-seq

updated 3.4 years ago by Biostar 20 • written 3.5 years ago by Assa Yeroslaviz ★ 1.8k

3

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9

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954

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blast annotation

updated 3.4 years ago by GenoMax 142k • written 3.4 years ago by Assa Yeroslaviz ★ 1.8k